RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SKAP2O75563 359 aaPredicted RBP19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 NEBLO76041 1014 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 JUNP05412 331 aaKnown RBP19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 GRK4P32298 578 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 SERPINB5P36952 375 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 FCGRTP55899 365 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 CCNIQ14094 377 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 FAM26DQ5JW98 314 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 PAXIP1Q6ZW49 1069 aaPredicted RBP19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 CCDC124Q96CT7 223 aaKnown RBP19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 PPP1R2P1Q96PQ5 205 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZIC5Q96T25 663 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 NUF2Q9BZD4 464 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 DNAJB4Q9UDY4 337 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 FBXO5Q9UKT4 447 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 CORO1CQ9ULV4 474 aaPredicted RBP19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 SCML2Q9UQR0 700 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 NOD1Q9Y239 953 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 SSX2IPQ9Y2D8 614 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 BAG2O95816 211 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 POLD2P49005 469 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRKAA2P54646 552 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 MAXP61244 160 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRKCZQ05513 592 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 KLC1Q07866 573 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 DSC1Q08554 894 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 IHHQ14623 411 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZNF789Q5FWF6 425 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 CLLU1OSQ5K130 101 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 CNSTQ6PJW8 725 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 MON1AQ86VX9 555 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 HPS6Q86YV9 775 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 NUP93Q8N1F7 819 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PYDC1Q8WXC3 89 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 HMCESQ96FZ2 354 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZNF184Q99676 751 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 S100A14Q9HCY8 104 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 TBC1D13Q9NVG8 400 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 NDE1Q9NXR1 346 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 VWA8A3KMH1 1905 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 FAM155AB1AL88 458 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 FKBP6O75344 327 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 CNTN5O94779 1100 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 UPP2O95045 317 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 OAZ2O95190 189 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 HAPLN1P10915 354 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PAMP19021 973 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 DNAJB1P25685 340 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 CD151P48509 253 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 CAP1Q01518 475 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 TBL3Q12788 808 aaKnown RBP19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRKAA1Q13131 559 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 ALFQ53S48 1182 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 RBM20Q5T481 1227 aaKnown RBP19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 RNF111Q6ZNA4 994 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 LRRC49Q8IUZ0 686 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 UMODL1-AS1Q8N2C9 162 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PNPLA1Q8N8W4 532 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 KLHL5Q96PQ7 755 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 SLC25A51Q9H1U9 297 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 NT5MQ9NPB1 228 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRDM5Q9NQX1 630 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 ARHGAP26Q9UNA1 814 aa19.74■□□□□ 0.75
CDC42EP1-201ENST00000249014 CRABP2P29373 138 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 NSUN2Q08J23 767 aaKnown RBP eCLIP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 SLC10A7Q0GE19 358 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 MS4A13Q5J8X5 152 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 PPM1LQ5SGD2 360 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 NEPROQ6NW34 567 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 MSANTD2Q6P1R3 559 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 AAGABQ6PD74 315 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 GLB1LQ6UWU2 654 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 TTC9BQ8N6N2 239 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 GPR152Q8TDT2 470 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 HEXDCQ8WVB3 486 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 IMP4Q96G21 291 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 NDNQ99608 321 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 RTKNQ9BST9 563 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 ATP13A1Q9HD20 1204 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 RGS18Q9NS28 235 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 GMIPQ9P107 970 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 G3BP2Q9UN86 482 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 POMPQ9Y244 141 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 PIK3R1P27986 724 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 TBX4P57082 545 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 MRPS35P82673 323 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 HNRNPDQ14103 355 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZRSR2Q15696 482 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 TCHHL1Q5QJ38 904 aaPredicted RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 IRGCQ6NXR0 463 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 TXNDC5Q8NBS9 432 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 SGF29Q96ES7 293 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 CNDP1Q96KN2 507 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRKD2Q9BZL6 878 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 MRPL46Q9H2W6 279 aaKnown RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 ARNT2Q9HBZ2 717 aa19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
CDC42EP1-201ENST00000249014 TTC24A2A3L6 582 aaPredicted RBP19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 TBX18O95935 607 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms