RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MED26O95402 600 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 KRT6CP48668 564 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 SMARCB1Q12824 385 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 AHI1Q8N157 1196 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 GRIN3AQ8TCU5 1115 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 RNF31Q96EP0 1072 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
RIF1-201ENST00000243326 GLIS2Q9BZE0 524 aaPredicted RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 PPIEQ9UNP9 301 aaKnown RBP7.59□□□□□ -1.19
RIF1-201ENST00000243326 GZMAP12544 262 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 TCEA1P23193 301 aaKnown RBP7.59□□□□□ -1.2
RIF1-201ENST00000243326 SHMT1P34896 483 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 GMPRP36959 345 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 MSLNQ13421 630 aaPredicted RBP7.59□□□□□ -1.2
RIF1-201ENST00000243326 PLA2G4EQ3MJ16 856 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 SAMD4BQ5PRF9 694 aaKnown RBP7.59□□□□□ -1.2
RIF1-201ENST00000243326 TPGS1Q6ZTW0 290 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 DENND6AQ8IWF6 608 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 B3GNT5Q9BYG0 378 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 XPR1Q9UBH6 696 aa7.59□□□□□ -1.2
RIF1-201ENST00000243326 DHRS12A0PJE2 317 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 EFCAB14O75071 495 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 DENND5AQ6IQ26 1287 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PYROXD2Q8N2H3 581 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 LPGAT1Q92604 370 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 KIFC1Q9BW19 673 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 SNX15Q9NRS6 342 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 SH3GLB1Q9Y371 365 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 RAD54BQ9Y620 910 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 MYL12BO14950 172 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 VCLP18206 1134 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 BDNFP23560 247 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CCR10P46092 362 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 HIST2H2ACQ16777 129 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 TIGD2Q4W5G0 525 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 HIST2H2AA3Q6FI13 130 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 BTN2A1Q7KYR7 527 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ANKRD13AQ8IZ07 590 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TOP1MTQ969P6 601 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 COL26A1Q96A83 441 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 SLC39A3Q9BRY0 314 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CNPPD1Q9BV87 410 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 EBPLQ9BY08 206 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ULBP1Q9BZM6 244 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 MROH8Q9H579 483 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 A0A075B6Q4 140 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 GJA8P48165 433 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 LIN52Q52LA3 116 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 DSELQ8IZU8 1212 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 SOX17Q9H6I2 414 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 FADS3Q9Y5Q0 445 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ERBB2P04626 1255 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 S100A3P33764 101 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 GMPSP49915 693 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CXorf57Q6NSI4 855 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 PQLC1Q8N2U9 271 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ING5Q8WYH8 240 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TKTL2Q9H0I9 626 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 COQ3Q9NZJ6 369 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 SH3BP1Q9Y3L3 701 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 GPR75-ASB3A0A0A6YYF3 556 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PSMD9O00233 223 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 LIN7AO14910 233 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 KHDRBS3O75525 346 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 PDE9AO76083 593 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 DARSP14868 501 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 CES1P23141 567 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 NR1H2P55055 460 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PRAMEF19Q5SWL8 479 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 FAM131AQ6UXB0 335 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 KRT74Q7RTS7 529 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 HSD3B7Q9H2F3 369 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 EPS8L2Q9H6S3 715 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CNOT6Q9ULM6 557 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 CUL9Q8IWT3 2517 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CFHP08603 1231 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 NNMTP40261 264 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 NKX2-5P52952 324 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 QPRTQ15274 297 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TBC1D21Q8IYX1 336 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CFAP52Q8N1V2 620 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 DNAJC19Q96DA6 116 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 COQ6Q9Y2Z9 468 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TCRBV7S3A2A0A539 114 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 HGFP14210 728 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PIGFQ07326 219 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CAMK2GQ13555 558 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 TDRD10Q5VZ19 366 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 FNIP1Q8TF40 1166 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CLEC4MQ9H2X3 399 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 F5H5T6 163 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 KLF10Q13118 480 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 GPSM1Q86YR5 675 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TCAIMQ8N3R3 496 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 COX4I2Q96KJ9 171 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TBCBQ99426 244 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms