RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TRHDEQ9UKU6 1024 aa8.1□□□□□ -1.11
CXCR4-201ENST00000241393 AGAP1Q9UPQ3 857 aa8.1□□□□□ -1.11
CXCR4-201ENST00000241393 HCFC2Q9Y5Z7 792 aa8.1□□□□□ -1.11
CXCR4-201ENST00000241393 HNRNPCL1O60812 293 aaKnown RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 TMEM63AO94886 807 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 UNC5CO95185 931 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 LGALS2P05162 132 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PGK2P07205 417 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 GSTA2P09210 222 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 INSRRP14616 1297 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 EZRP15311 586 aaKnown RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 CCND1P24385 295 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PTX3P26022 381 aaPredicted RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 STAT5AP42229 794 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 CDH8P55286 799 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 OSTNP61366 133 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 DPYSL3Q14195 570 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PARP6Q2NL67 630 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 SMTNL2Q2TAL5 461 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 DCAF4L1Q3SXM0 396 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 FAM102AQ5T9C2 384 aaPredicted RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 HHATQ5VTY9 493 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 ANKRD22Q5VYY1 191 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 C3orf62Q6ZUJ4 267 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 ZBTB46Q86UZ6 589 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 ZNF410Q86VK4 478 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 FAM228AQ86W67 206 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 ECHDC2Q86YB7 292 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 ZDHHC17Q8IUH5 632 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PALM2Q8IXS6 379 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PPTC7Q8NI37 304 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 SPATA18Q8TC71 538 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 MZB1Q8WU39 189 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 TRAPPC12Q8WVT3 735 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 LRRC39Q96DD0 335 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 RAB3IPQ96QF0 476 aaPredicted RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PAFAH2Q99487 392 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 NOD2Q9HC29 1040 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 GBA2Q9HCG7 927 aaPredicted RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 TXNRD2Q9NNW7 524 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 MLXIPLQ9NP71 852 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PNPLA8Q9NP80 782 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 MSRAQ9UJ68 235 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 PHTF1Q9UMS5 762 aa8.09□□□□□ -1.11
CXCR4-201ENST00000241393 POLR2AP24928 1970 aaKnown RBP8.09□□□□□ -1.11
CXCR4-201ENST00000241393 A0A087WZ62 844 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 IQANK1A0A1B0GTG1 560 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 BCLAF3A2AJT9 711 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF839A8K0R7 811 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FOXO6A8MYZ6 492 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 MDM4O15151 490 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PRPSAP2O60256 369 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SPAG7O75391 227 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 IL1BP01584 269 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 GJB1P08034 283 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CD48P09326 243 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 IQCF3P0C7M6 154 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ARF4P18085 180 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RPA3P35244 121 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 MSH2P43246 934 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 NDST1P52848 882 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 DYNLT1P63172 113 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CDC42EP1Q00587 391 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 KCNJ11Q14654 390 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SLC45A4Q5BKX6 768 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 KCNT1Q5JUK3 1230 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FNBP1LQ5T0N5 605 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FSTL4Q6MZW2 842 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CYP4V2Q6ZWL3 525 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ARCQ7LC44 396 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TBC1D1Q86TI0 1168 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CHSY1Q86X52 802 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 UNC45BQ8IWX7 931 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 EMC1Q8N766 993 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 BANPQ8N9N5 519 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FBXO36Q8NEA4 188 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 DCAKDQ8WVC6 231 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RXFP2Q8WXD0 754 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RMDN2Q96LZ7 410 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RNF157Q96PX1 679 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TMEM237Q96Q45 408 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FDXACB1Q9BRP7 624 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF670Q9BS34 389 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CALN1Q9BXU9 219 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ASPSCR1Q9BZE9 553 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 LRMDAQ9H2I8 198 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RNPEPQ9H4A4 650 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PRDM16Q9HAZ2 1276 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CD248Q9HCU0 757 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 HMGXB4Q9UGU5 601 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PCSK1NQ9UHG2 260 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 XPO7Q9UIA9 1087 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RPL26L1Q9UNX3 145 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TRDMT1O14717 391 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TSPAN1O60635 241 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms