RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 RAD51CO43502 376 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 MARCKSL1P49006 195 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TPI1P60174 286 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TNK2Q07912 1038 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 EFEMP1Q12805 493 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 SLC12A1Q13621 1099 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 PDK1Q15118 436 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 NOMO1Q15155 1222 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 EMC10Q5UCC4 262 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 THOC7Q6I9Y2 204 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TANGO2Q6ICL3 276 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 AADACL2Q6P093 401 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 LMNTD2Q8IXW0 634 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 ZNF683Q8IZ20 524 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TRPC4APQ8TEL6 797 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 RAPGEF5Q92565 580 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 LRRC45Q96CN5 670 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 RTP4Q96DX8 246 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 YIPF4Q9BSR8 244 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 FOXP3Q9BZS1 431 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 ZYG11BQ9C0D3 744 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 DDX47Q9H0S4 455 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 MRPL46Q9H2W6 279 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 DHX35Q9H5Z1 703 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TMEM248Q9NWD8 314 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 HCFC1R1Q9NWW0 138 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 C6orf203Q9P0P8 240 aaPredicted RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 PCSK1NQ9UHG2 260 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 CDV3Q9UKY7 258 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TMCC3Q9ULS5 477 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 BCLAF3A2AJT9 711 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 GFRA2O00451 464 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 DCLK1O15075 740 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 PAGE1O75459 146 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 TNFRSF21O75509 655 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SOAT2O75908 522 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 GAS8O95995 478 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 HDCP19113 662 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CARSP49589 748 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CSE1LP55060 971 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CAV1Q03135 178 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 PIN1Q13526 163 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 MAP7Q14244 749 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SUZ12Q15022 739 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SIX1Q15475 284 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 TEAD2Q15562 447 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ITPRIPL2Q3MIP1 535 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ADGRF1Q5T601 910 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SDHAF4Q5VUM1 108 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 AFMIDQ63HM1 303 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 TIGD7Q6NT04 549 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 FAM131BQ86XD5 332 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 RFX6Q8HWS3 928 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 IFT20Q8IY31 132 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CCDC185Q8N715 623 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SLC35B2Q8TB61 432 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 HSPH1Q92598 858 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 NAF1Q96HR8 494 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 TSGA13Q96PP4 275 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SLC2A11Q9BYW1 496 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ATXN3LQ9H3M9 355 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ZMAT5Q9UDW3 170 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 OR12D3Q9UGF7 316 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 RAB23Q9ULC3 237 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ZNF318Q5VUA4 2279 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 TRIM64CA6NLI5 447 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 F5H5T6 163 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 H0Y858 1186 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 MCF2LO15068 1137 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CLDN11O75508 207 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 STC2O76061 302 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 MBL2P11226 248 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 TDGF1P13385 188 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 DRD1P21728 446 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 IL4RP24394 825 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 GDI1P31150 447 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 EIF2DP41214 584 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CDH4P55283 916 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SLC14A2Q15849 920 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 PARP15Q460N3 678 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 GPR158Q5T848 1215 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 GAREM2Q75VX8 874 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 LONP2Q86WA8 852 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 CMTM8Q8IZV2 173 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 OR8H2Q8N162 312 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 UMODL1-AS1Q8N2C9 162 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 RTL3Q8N8U3 475 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 HJURPQ8NCD3 748 aaPredicted RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 NDRG1Q92597 394 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ACDQ96AP0 544 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 SH3KBP1Q96B97 665 aa9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
TGFB3-201ENST00000238682 ZNF599Q96NL3 588 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms