RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 NDNQ99608 321 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ZSWIM1Q9BR11 485 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ATAD3AQ9NVI7 634 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 MAGI2Q86UL8 1455 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 BPNT1O95861 308 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 NBPF12Q5TAG4 269 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 CCNJLQ8IV13 435 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 STARD8Q92502 1023 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ITCHQ96J02 903 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 POLR1EQ9GZS1 481 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 BRD9Q9H8M2 597 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 PCDHGB3Q9Y5G1 929 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ZNF609O15014 1411 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 HDCP19113 662 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 BTN3A2P78410 334 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 QRFPRQ96P65 431 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CDC42EP4Q9H3Q1 356 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 CXorf56Q9H5V9 222 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 MGAT4AQ9UM21 535 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 S100A6P06703 90 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 DGKAP23743 735 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 TUFMP49411 452 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 GALK1P51570 392 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 PKNOX1P55347 436 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ELAVL2Q12926 359 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 FRMD8P1Q9BZ68 369 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 PNPLA7Q6ZV29 1317 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 RNF17Q9BXT8 1623 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
NEK9-201ENST00000238616 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ENTPD3O75355 529 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 SLC25A14O95258 325 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 SCTRP47872 440 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ATXN1P54253 815 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 RBM43Q6ZSC3 357 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 MSANTD1Q6ZTZ1 278 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 OAFQ86UD1 273 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CDYL2Q8N8U2 506 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 BRINP2Q9C0B6 783 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CNOT6Q9ULM6 557 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 A0A087X1B8 175 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 F8VZ95 297 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ELFN1P0C7U0 828 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CAP2P40123 477 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CXorf57Q6NSI4 855 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 ZNF615Q8N8J6 731 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 MAB21L3Q8N8X9 362 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 TSEN15Q8WW01 171 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 SIRPGQ9P1W8 387 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 GIT1Q9Y2X7 761 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 SPEF1Q9Y4P9 236 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CPSF1Q10570 1443 aaKnown RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 TRBV23OR9-2A0A075B6M9 112 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 CLOCKO15516 846 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SNX4O95219 450 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 IFNA6P05013 189 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SLC6A2P23975 617 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 BHLHB9Q6PI77 547 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SETD9Q8NE22 299 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 OR6K2Q8NGY2 324 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 MLPHQ9BV36 600 aaPredicted RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 LACTBL1A8MY62 500 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 FRG1Q14331 258 aaKnown RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 CXXC5Q7LFL8 322 aaKnown RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 UBR7Q8N806 425 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SGCDQ92629 289 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 PIRTP0C851 137 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 DNASE1L1P49184 302 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 GALNT3Q14435 633 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 ZNF613Q6PF04 617 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 FNDC11Q9BVV2 318 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 C8orf4Q9NR00 106 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 TPP1O14773 563 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 CCDC166P0CW27 439 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 ABCG1P45844 678 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 MED22Q15528 200 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 MINDY4Q4G0A6 757 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 PSRC1Q6PGN9 363 aaPredicted RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 JAZF1Q86VZ6 243 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SLC4A11Q8NBS3 891 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 HTR3CQ8WXA8 447 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 METTL21AQ8WXB1 218 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SLC9A3R1O14745 358 aaPredicted RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 KMOO15229 486 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 MED24O75448 989 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 GCATO75600 419 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 ALDH3A2P51648 485 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 USP46P62068 366 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 ACAP1Q15027 740 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 PHYKPLQ8IUZ5 450 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 PYDC1Q8WXC3 89 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms