RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 NAB1Q13506 487 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 SIRPB2Q5JXA9 342 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 ARMC3Q5W041 872 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 FEM1CQ96JP0 617 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 LMLNQ96KR4 655 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 SMC6Q96SB8 1091 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 LINC00597Q9H2U6 94 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 SFXN1Q9H9B4 322 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 MRM3Q9HC36 420 aaKnown RBP15.39■□□□□ 0.05
HDHD3-201ENST00000238379 KCNK9Q9NPC2 374 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 PRKAG3Q9UGI9 489 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 HMX2A2RU54 273 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 RFXAPO00287 272 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 INSIG1O15503 277 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 KRT37O76014 449 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 PENKP01210 267 aaPredicted RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SNRPAP09012 282 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 KRT4P19013 534 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 CD70P32970 193 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SERPINH1P50454 418 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SCNN1BP51168 640 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 CDK18Q07002 472 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 LGSNQ5TDP6 509 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 C4orf33Q8N1A6 199 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 PPHLN1Q8NEY8 458 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 ATXN2LQ8WWM7 1075 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 ACDQ96AP0 544 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 EXOC2Q96KP1 924 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 TRIB3Q96RU7 358 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 CDCA3Q99618 268 aaPredicted RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 C2orf49Q9BVC5 232 aaPredicted RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 INTS9Q9NV88 658 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 ZFATQ9P243 1243 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 TBC1D14Q9P2M4 693 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 LHX3Q9UBR4 397 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 INTS6Q9UL03 887 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 CCDC78A2IDD5 438 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 TRIM49D1C9J1S8 452 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 PRPF4O43172 522 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 TYROBPO43914 113 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SPAG7O75391 227 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 MT-CO1P00395 513 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 CES1P23141 567 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SERPINB9P50453 376 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 PLK1P53350 603 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SMAD1Q15797 465 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 PACS1Q6VY07 963 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SH2D5Q6ZV89 423 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 RASSF3Q86WH2 238 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 IRF7Q92985 503 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 MRPL38Q96DV4 380 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SERAC1Q96JX3 654 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 NUDCD1Q96RS6 583 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 RANBP9Q96S59 729 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 SSU72Q9NP77 194 aaKnown RBP15.38■□□□□ 0.05
HDHD3-201ENST00000238379 TREX1Q9NSU2 369 aa15.38■□□□□ 0.05
HDHD3-201ENST00000238379 MIA3Q5JRA6 1907 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 FAM47DPA6NHR8 397 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 KRT38O76015 456 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 MT-ND3P03897 115 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 WEE1P30291 646 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 HLA-FP30511 346 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 SLC18A1P54219 525 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 NSUN2Q08J23 767 aaKnown RBP eCLIP15.37■□□□□ 0.05
HDHD3-201ENST00000238379 SLC12A1Q13621 1099 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 PLEKHG6Q3KR16 790 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 HSP90AA5PQ58FG0 334 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 TEDDM1Q5T9Z0 273 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 ESRP1Q6NXG1 681 aaKnown RBP15.37■□□□□ 0.05
HDHD3-201ENST00000238379 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 ADGRG2Q8IZP9 1017 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 OTUB2Q96DC9 234 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 IFT43Q96FT9 208 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 LRRC3BQ96PB8 259 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 SCUBE2Q9NQ36 999 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 SPHK2Q9NRA0 654 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 C20orf96Q9NUD7 363 aaPredicted RBP15.37■□□□□ 0.05
HDHD3-201ENST00000238379 SMG5Q9UPR3 1016 aaKnown RBP15.37■□□□□ 0.05
HDHD3-201ENST00000238379 WNT6Q9Y6F9 365 aa15.37■□□□□ 0.05
HDHD3-201ENST00000238379 HEATR9A2RTY3 570 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 K7ERQ8 282 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 FGF1P05230 155 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 CNTFP26441 200 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 ARNTP27540 789 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 BMPR2Q13873 1038 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 LY6G5CQ5SRR4 150 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 RETSATQ6NUM9 610 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 KCNMB4Q86W47 210 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 CELF5Q8N6W0 485 aaKnown RBP15.36■□□□□ 0.05
HDHD3-201ENST00000238379 ANKRD42Q8N9B4 389 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 BANPQ8N9N5 519 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 ATP2A3Q93084 1043 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 ALKBH8Q96BT7 664 aaKnown RBP15.36■□□□□ 0.05
HDHD3-201ENST00000238379 MTBPQ96DY7 904 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 AGAP2Q99490 1192 aa15.36■□□□□ 0.05
HDHD3-201ENST00000238379 KLF6Q99612 283 aaPredicted RBP15.36■□□□□ 0.05
HDHD3-201ENST00000238379 BBS2Q9BXC9 721 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms