RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 MTG2Q9H4K7 406 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 KLHL11Q9NVR0 708 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 WSB2Q9NYS7 404 aaPredicted RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 SEPT3Q9UH03 358 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 ANGPTL2Q9UKU9 493 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 PPM1HQ9ULR3 514 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 TFR2Q9UP52 801 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 DUSP10Q9Y6W6 482 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 PATE3B3GLJ2 98 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 KPNA3O00505 521 aaPredicted RBP11.45□□□□□ -0.58
SF3B6-201ENST00000233468 MID1O15344 667 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 KCNK5O95279 499 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 VAV1P15498 845 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 BCKDHBP21953 392 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 CTNNA2P26232 953 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 CTNNA1P35221 906 aaKnown RBP11.45□□□□□ -0.58
SF3B6-201ENST00000233468 HOXD12P35452 270 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 NR2C2P49116 596 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 DHPSP49366 369 aaPredicted RBP11.45□□□□□ -0.58
SF3B6-201ENST00000233468 CCNHP51946 323 aaPredicted RBP11.45□□□□□ -0.58
SF3B6-201ENST00000233468 RWDD2BP57060 319 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF33AQ06730 810 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 NSUN2Q08J23 767 aaKnown RBP eCLIP11.45□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF235Q14590 738 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 PDK1Q15118 436 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 MYLK3Q32MK0 819 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 TFDP3Q5H9I0 405 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 LYSMD4Q5XG99 296 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 NCBP2-AS2Q69YL0 99 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 DPY19L3Q6ZPD9 716 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 CACUL1Q86Y37 369 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 HDDC3Q8N4P3 179 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 NPWQ8N729 165 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 PIP4K2CQ8TBX8 421 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 FERMT1Q9BQL6 677 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 TM6SF2Q9BZW4 377 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 VPS45Q9NRW7 570 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 SALL4Q9UJQ4 1053 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 HYOU1Q9Y4L1 999 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 PCDHA3Q9Y5H8 950 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 DMXL2Q8TDJ6 3036 aa11.45□□□□□ -0.58
SF3B6-201ENST00000233468 PCNX2A6NKB5 2137 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 BCLAF3A2AJT9 711 aaKnown RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 C4orf47A7E2U8 309 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 J3KR12 359 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 KRIT1O00522 736 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ZSCAN12O43309 604 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF821O75541 412 aaPredicted RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF189O75820 626 aaPredicted RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 SEMA4FO95754 770 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CD160O95971 181 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 TOP3BO95985 862 aaKnown RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 GNSP15586 552 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 TGM2P21980 687 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CES1P23141 567 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CCNCP24863 283 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 NUDT1P36639 197 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 GARSP41250 739 aaKnown RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CSNK1DP48730 415 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 GALNT2Q10471 571 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 HNRNPDQ14103 355 aaKnown RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 PPP2R5EQ16537 467 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 RALGPS1Q5JS13 557 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CFAP58Q5T655 872 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CCDC181Q5TID7 509 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 MARC1Q5VT66 337 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 SLC9A4Q6AI14 798 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 PSAPL1Q6NUJ1 521 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 LEKR1Q6ZMV7 388 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 SPOCD1Q6ZMY3 1216 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CYP2U1Q7Z449 544 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 FAM124AQ86V42 546 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ZSCAN30Q86W11 494 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CPNE8Q86YQ8 564 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 FRMD1Q8N878 549 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 LRRC57Q8N9N7 239 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CCNYQ8ND76 341 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 HCAR2Q8TDS4 363 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 FATE1Q969F0 183 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 RAB7BQ96AH8 199 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF419Q96HQ0 510 aaPredicted RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 EDEM2Q9BV94 578 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 GPR174Q9BXC1 333 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 HDAC8Q9BY41 377 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CPEB1Q9BZB8 566 aaKnown RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ZDHHC6Q9H6R6 413 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 PDFQ9HBH1 243 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 ETNK2Q9NVF9 386 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 SUSD2Q9UGT4 822 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 AMACRQ9UHK6 382 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 MBD1Q9UIS9 605 aaPredicted RBP11.44□□□□□ -0.58
SF3B6-201ENST00000233468 GUCA1BQ9UMX6 200 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 EFR3BQ9Y2G0 817 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 MFHAS1Q9Y4C4 1052 aa11.44□□□□□ -0.58
SF3B6-201ENST00000233468 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 NBEAQ8NFP9 2946 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 IGF2RP11717 2491 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms