RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CHRNGP07510 517 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 COX7A2P14406 83 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 HNF4AP41235 474 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 FRMD7Q6ZUT3 714 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ZNF668Q96K58 619 aaPredicted RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 POP1Q99575 1024 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 SLC39A8Q9C0K1 460 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SLC22A3O75751 556 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 MMP10P09238 476 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PCNAP12004 261 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SLC12A3P55017 1021 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 HERC3Q15034 1050 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PCDH12Q9NPG4 1184 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SNX8Q9Y5X2 465 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SUPT20HL2P0C7V6 817 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SLC5A3P53794 718 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ATN1P54259 1190 aaPredicted RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 PTP4A2Q12974 167 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PFKFB4Q16877 469 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 GLB1LQ6UWU2 654 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 FAM220AQ7Z4H9 259 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 TMEM110Q86TL2 294 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PEX5LQ8IYB4 626 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PNMA5Q96PV4 448 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 A0A1W2PQ72 361 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 UGT2B15P54855 530 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 NFE2Q16621 373 aaPredicted RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 CAMKK1Q8N5S9 505 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SAMD4AQ9UPU9 718 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 CEP152O94986 1710 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SGTAO43765 313 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ACO1P21399 889 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 DGKAP23743 735 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ADGRE1Q14246 886 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SYCE2Q6PIF2 218 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 DSELQ8IZU8 1212 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SPAG16Q8N0X2 631 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 OR6J1Q8NGC5 347 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SLC47A1Q96FL8 570 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ADI1Q9BV57 179 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SUV39H1O43463 412 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ULK1O75385 1050 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 IST1P53990 364 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 TRIM32Q13049 653 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 FAM131AQ6UXB0 335 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 TMIEQ8NEW7 156 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 CRISPLD1Q9H336 500 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SAE1Q9UBE0 346 aaPredicted RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 H7C4K7 107 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 BTN3A1O00481 513 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 OTCP00480 354 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 HMGCS2P54868 508 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ZBED5Q49AG3 693 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 TAF8Q7Z7C8 310 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SATL1Q86VE3 508 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 TTYH1Q9H313 450 aaPredicted RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 TADA2AO75478 443 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 REM1O75628 298 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RPS9P46781 194 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 CNSTQ6PJW8 725 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 DDX53Q86TM3 631 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 BHMTQ93088 406 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 DNAAF2Q9NVR5 837 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 REXO2Q9Y3B8 237 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 hCG_1818297A0A087WSY0 165 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RNASEH1O60930 286 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 PRLP01236 227 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ERCC2P18074 760 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 KHDC1Q4VXA5 237 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 ALFQ53S48 1182 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 FBXO42Q6P3S6 717 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 TMEM126BQ8IUX1 230 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ITCHQ96J02 903 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 GTF2A1LQ9UNN4 478 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 USP20Q9Y2K6 914 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.28□□□□□ -1.082e-6■■■■□ 20.5
APOB-201ENST00000233242 KLRC4O43908 158 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 PLOD3O60568 738 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 CCNB1P14635 433 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 IL18R1Q13478 541 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 C6orf52Q5T4I8 152 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RBM12BQ8IXT5 1001 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 PTCD2Q8WV60 388 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 TBCDQ9BTW9 1192 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 A0A087WZ62 844 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ARHGEF33A8MVX0 844 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 TFECO14948 347 aaPredicted RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 KPNA5O15131 536 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 HGFP14210 728 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RHAGQ02094 409 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 KLF10Q13118 480 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ARMC6Q6NXE6 501 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 GCNT7Q6ZNI0 430 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 REXO5Q96IC2 774 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 ALG9Q9H6U8 611 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 GPRIN3Q6ZVF9 776 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms