RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SGCDQ92629 289 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 REXO5Q96IC2 774 aaKnown RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 WDR55Q9H6Y2 383 aaPredicted RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 ZBTB26Q9HCK0 441 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 SAE1Q9UBE0 346 aaPredicted RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 PDZK1P1A8MUH7 402 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 SEPHS1P49903 392 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 ADARB1P78563 741 aaKnown RBP13.15□□□□□ -0.3
MSH2-201ENST00000233146 GEN1Q17RS7 908 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 C12orf60Q5U649 245 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 UNC45BQ8IWX7 931 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 FAM71DQ8N9W8 422 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 BCL7BQ9BQE9 202 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 ALOXE3Q9BYJ1 711 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 UNC93B1Q9H1C4 597 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 AGPAT4Q9NRZ5 378 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 MAT2BQ9NZL9 334 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 MEGF6O75095 1541 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 CDK5RAP2Q96SN8 1893 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.3
MSH2-201ENST00000233146 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 HEATR9A2RTY3 570 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 SAGE2PA6NJ88 616 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 OR5K4A6NMS3 321 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 AXIN1O15169 862 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 NDUFA2O43678 99 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 ELK4P28324 431 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 ACOT2P49753 483 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 NDST1P52848 882 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 GTF2IP78347 998 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 METTL2BQ6P1Q9 378 aaKnown RBP13.15□□□□□ -0.3
MSH2-201ENST00000233146 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
MSH2-201ENST00000233146 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 ANKRD53Q8N9V6 530 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 OR2T34Q8NGX1 318 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 MUL1Q969V5 352 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 DSN1Q9H410 356 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 WASH6PQ9NQA3 447 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 CCM2LQ9NUG4 571 aaPredicted RBP13.15□□□□□ -0.3
MSH2-201ENST00000233146 CD300AQ9UGN4 299 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 GAKO14976 1311 aa13.15□□□□□ -0.3
MSH2-201ENST00000233146 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 M0R3G1 203 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 PDHXO00330 501 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 CTDSP2O14595 271 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 SLITRK5O94991 958 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 EPHX2P34913 555 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 KCNJ11Q14654 390 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 LRRC38Q5VT99 294 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 SDE2Q6IQ49 451 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 FAM171BQ6P995 826 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 HID1Q8IV36 788 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 OR7A2PQ8NGA2 310 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 SEMA4DQ92854 862 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 APBA2Q99767 749 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 MCMBPQ9BTE3 642 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.31
MSH2-201ENST00000233146 CHST12Q9NRB3 414 aa13.15□□□□□ -0.31
MSH2-201ENST00000233146 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.31
MSH2-201ENST00000233146 ZC3H7BQ9UGR2 993 aaKnown RBP13.15□□□□□ -0.31
MSH2-201ENST00000233146 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 ZNF254O75437 659 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 GABARAPO95166 117 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 SRP54P61011 504 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 YWHAZP63104 245 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 GDPD3Q7L5L3 318 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 TTLQ8NG68 377 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 NDNFQ8TB73 568 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 FERD3LQ96RJ6 166 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 FAM159BA6NKW6 160 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 ZBTB39O15060 712 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 SEC24AO95486 1093 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 CD4P01730 458 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 ADORA2AP29274 412 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 NSFP46459 744 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 GNA13Q14344 377 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 KIZQ2M2Z5 673 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 ADPRMQ3LIE5 342 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 VN1R5Q7Z5H4 357 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 WDR49Q8IV35 697 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 UBQLNLQ8IYU4 475 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms