RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 KCTD15Q96SI1 283 aaPredicted RBP6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 CDC6Q99741 560 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 SLC17A9Q9BYT1 436 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 NOL6Q9H6R4 1146 aaKnown RBP6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 MBNL1Q9NR56 388 aaKnown RBP6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 KLHL11Q9NVR0 708 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 RRN3Q9NYV6 651 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 ZNF212Q9UDV6 495 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 KLF15Q9UIH9 416 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 RABGEF1Q9UJ41 708 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 MOSPD1Q9UJG1 213 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 FZD10Q9ULW2 581 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 HS3ST2Q9Y278 367 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 PAXBP1Q9Y5B6 917 aa6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 DSPP15924 2871 aaKnown RBP6.97□□□□□ -1.29
GTF2H3-201ENST00000228955 PTPRBP23467 1997 aa6.96□□□□□ -1.29
GTF2H3-201ENST00000228955 IGLV3-10A0A075B6K4 115 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PMS2P1A4D2B8 440 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 ANKRD62A6NC57 917 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 GOLGA6CA6NDK9 693 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 GOLGA6BA6NDN3 693 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 SIGLEC16A6NMB1 481 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 BHMG1C9JSJ3 638 aaPredicted RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PRAMEF26H0Y7S4 382 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 EEF2KO00418 725 aaKnown RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 MUSKO15146 869 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 TRIM16O95361 564 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PCCBP05166 539 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 GOLGA6DP0CG33 693 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 TNNT1P13805 278 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 RHOQP17081 205 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 DGKAP23743 735 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 ITPKBP27987 946 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 L1CAMP32004 1257 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 EIF2S3P41091 472 aaKnown RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 RGRP47804 291 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 ZNF165P49910 485 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PAPOLAP51003 745 aaKnown RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 NEK3P51956 506 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 TPI1P60174 286 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 KLHL30Q0D2K2 578 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 CYTH1Q15438 398 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 KLHL40Q2TBA0 621 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 C5orf22Q49AR2 442 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 SFMBT2Q5VUG0 894 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 KCTD16Q68DU8 428 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 RBM43Q6ZSC3 357 aaKnown RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 ZNF677Q86XU0 584 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 CAMK1DQ8IU85 385 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 SFTPA2Q8IWL1 248 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 ARFGAP1Q8N6T3 406 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 MFSD2AQ8NA29 543 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 KDM1BQ8NB78 822 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 TMIEQ8NEW7 156 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 BAHD1Q8TBE0 780 aaPredicted RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 CXorf40AQ8TE69 158 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 TSACCQ96A04 125 aaPredicted RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 FEM1CQ96JP0 617 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 BMFQ96LC9 184 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 SMIM14Q96QK8 99 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 SLC39A8Q9C0K1 460 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PCED1AQ9H1Q7 454 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 ETNK2Q9NVF9 386 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 GOLGA6AQ9NYA3 693 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 GULP1Q9UBP9 304 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 CNOT8Q9UFF9 292 aaKnown RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PNMA8BQ9ULN7 279 aaPredicted RBP6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 AP4E1Q9UPM8 1137 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 NEU3Q9UQ49 428 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 OR1A2Q9Y585 309 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 PCDHB1Q9Y5F3 818 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 FADS3Q9Y5Q0 445 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 LOC400499M0QZD8 3231 aa6.96□□□□□ -1.3
GTF2H3-201ENST00000228955 DDX3XO00571 662 aaKnown RBP eCLIP6.95□□□□□ -1.38e-13■■■■■ 31
GTF2H3-201ENST00000228955 LATO43561 262 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 KDELR3O43731 214 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 PCDHGA12O60330 932 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 BUB1BO60566 1050 aaPredicted RBP6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 RFPL3O75679 317 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 PRB1P04280 392 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 MPOP05164 745 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 TIMP2P16035 220 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 FERP16591 822 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 JUNDP17535 347 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 HNRNPA2B1P22626 353 aaKnown RBP6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 AMPD1P23109 780 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 ZNF143P52747 638 aaPredicted RBP6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 ADKP55263 362 aaKnown RBP6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 SNRPD1P62314 119 aaKnown RBP6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 CCDC173Q0VFZ6 552 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 MAMLD1Q13495 774 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 LLGL1Q15334 1064 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 FILIP1LQ4L180 1135 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 CFAP58Q5T655 872 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 FAXCQ5TGI0 409 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 MANEALQ5VSG8 457 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 TXNRD3NBQ6F5E7 133 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 GDPD4Q6W3E5 623 aa6.95□□□□□ -1.3
GTF2H3-201ENST00000228955 TRIM72Q6ZMU5 477 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms