RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 SLC22A12Q96S37 553 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TRIM56Q9BRZ2 755 aaKnown RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 MAN1C1Q9NR34 630 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 RCOR3Q9P2K3 495 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 STX18Q9P2W9 335 aaKnown RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TRIOBPQ9H2D6 2365 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 METTL18O95568 372 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 INHBAP08476 426 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 KPNA1P52294 538 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 DRAXINQ8NBI3 349 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 PTCD3Q96EY7 689 aaKnown RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 PANX3Q96QZ0 392 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ECSITQ9BQ95 431 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 NT5MQ9NPB1 228 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 GALNT8Q9NY28 637 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ACTL7BQ9Y614 415 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 MYO18AQ92614 2054 aaKnown RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CARNS1A5YM72 827 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 PRR5-ARHGAP8B1AHC4 643 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ABLIM3O94929 683 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 EPCAMP16422 314 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ARHGAP8P85298 464 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 OCRLQ01968 901 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ASPHQ12797 758 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZNF177Q13360 481 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 SLC5A9Q2M3M2 681 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 STXBP5Q5T5C0 1151 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 RNF135Q8IUD6 432 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 PPP1R36Q96LQ0 422 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CDK5RAP1Q96SZ6 601 aaKnown RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CENPKQ9BS16 269 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 FSD1LQ9BXM9 530 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZBP1Q9H171 429 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 FNDC3AQ9Y2H6 1198 aaKnown RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 RFXAPO00287 272 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 GSTA2P09210 222 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 TPH1P17752 444 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 MSX2P35548 267 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 NTHL1P78549 312 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CREMQ03060 361 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CDC16Q13042 620 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 OLIG2Q13516 323 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CDH18Q13634 790 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 TRIP10Q15642 601 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 GPR158Q5T848 1215 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 GATA6Q92908 595 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 TMA16Q96EY4 203 aaKnown RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 PGAP3Q96FM1 320 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 SPATA16Q9BXB7 569 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 VCX3BQ9H321 246 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 USP29Q9HBJ7 922 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 SAR1AQ9NR31 198 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CFAP97Q9P2B7 532 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 CLUHO75153 1309 aa11.87□□□□□ -0.51
TNFAIP1-201ENST00000226225 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 TCEA3O75764 348 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 CAPN15O75808 1086 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 TMEM63AO94886 807 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 VAV1P15498 845 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 TACR2P21452 398 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 GRIA1P42261 906 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 AP2B1P63010 937 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 RALGPS1Q5JS13 557 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 COL13A1Q5TAT6 717 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 OTOP3Q7RTS5 596 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 TRIM74Q86UV6 250 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 TRIM73Q86UV7 250 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ULK2Q8IYT8 1036 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ST13P4Q8IZP2 240 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ARHGAP24Q8N264 748 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 SPPL3Q8TCT6 385 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 HERVK_113Q902F9 699 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 IGSF8Q969P0 613 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ABHD8Q96I13 439 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZNF334Q9HCZ1 680 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 PDP2Q9P2J9 529 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 RABGEF1Q9UJ41 708 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZFP37Q9Y6Q3 630 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 BCLAF3A2AJT9 711 aaKnown RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 NCAM2O15394 837 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZBTB24O43167 697 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ACSL4O60488 711 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 HMGA1P17096 107 aaKnown RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 GARSP41250 739 aaKnown RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 SEPT6Q14141 434 aa11.86□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZNF235Q14590 738 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms