RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CSNK1EP49674 416 aaKnown RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 NEK3P51956 506 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 GSDMDP57764 484 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 GBE1Q04446 702 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 GALNT2Q10471 571 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 LBRQ14739 615 aaKnown RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 ZNF805Q5CZA5 627 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 TMCO4Q5TGY1 634 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 C11orf63Q6NUN7 778 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 GDPD4Q6W3E5 623 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 OR2I1PQ8NGU4 316 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 KRT35Q92764 455 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 KLK6Q92876 244 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 PPP1R16AQ96I34 528 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 NUSAP1Q9BXS6 441 aaKnown RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 TM9SF3Q9HD45 589 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 DDX56Q9NY93 547 aaKnown RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 SUSD2Q9UGT4 822 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 ANKRD36A6QL64 1941 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 PCDH15Q96QU1 1955 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 A0A1W2PPC4 97 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 WNT9AO14904 365 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 RNGTTO60942 597 aaKnown RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 PCDH8O95206 1070 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 ADRB3P13945 408 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 ENGP17813 658 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 ITIH2P19823 946 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 ABL2P42684 1182 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 MAPK8P45983 427 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 CCR5P51681 352 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 RAD51Q06609 339 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 RFTN1Q14699 578 aaPredicted RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 FAM182AQ5T1J6 154 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 STPG1Q5TH74 334 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 NPNTQ6UXI9 565 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 RABEPKQ7Z6M1 372 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 SRLQ86TD4 932 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 RFX6Q8HWS3 928 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 PGBD5Q8N414 524 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 PLD5Q8N7P1 536 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 LRIG1Q96JA1 1093 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 SLC6A18Q96N87 628 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 GTPBP2Q9BX10 602 aaKnown RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 OSBPL1AQ9BXW6 950 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 MAK16Q9BXY0 300 aaKnown RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 PREBQ9HCU5 417 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 SEPT3Q9UH03 358 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 GGT7Q9UJ14 662 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 CDV3Q9UKY7 258 aaKnown RBP12.84□□□□□ -0.35
LSM5-201ENST00000223084 ITM2BQ9Y287 266 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 FADS3Q9Y5Q0 445 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
LSM5-201ENST00000223084 A0A1B0GVT2 93 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 A0A1W2PQU0 124 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 MACROD2A1Z1Q3 448 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 GRID2IPA4D2P6 1211 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 C4orf47A7E2U8 309 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 APOL1O14791 398 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 LATO43561 262 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 KRT10P13645 584 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 TIMP2P16035 220 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 SCNN1BP51168 640 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 MAXP61244 160 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 DYNLT1P63172 113 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 BNC1Q01954 994 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 GRIK2Q13002 908 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 ZNF235Q14590 738 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 KAZNQ674X7 775 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 SEL1L3Q68CR1 1132 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 SLC9A4Q6AI14 798 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 SPOCD1Q6ZMY3 1216 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 TRIM69Q86WT6 500 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 CAMK1DQ8IU85 385 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 NETO1Q8TDF5 533 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.83□□□□□ -0.36
LSM5-201ENST00000223084 ZNF599Q96NL3 588 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 PSKH2Q96QS6 385 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.36
LSM5-201ENST00000223084 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 DTLQ9NZJ0 730 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 ZFR2Q9UPR6 939 aaKnown RBP12.83□□□□□ -0.36
LSM5-201ENST00000223084 CA5BQ9Y2D0 317 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 HEY1Q9Y5J3 304 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms