RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CNGB3Q9NQW8 809 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 FIS1Q9Y3D6 152 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 TIMM13Q9Y5L4 95 aaPredicted RBP17.47■□□□□ 0.39
USB1-201ENST00000219281 MYOCOSA0A1B0GUC4 107 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 MYBPHLA2RUH7 354 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 AP3B1O00203 1094 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 DFFAO00273 331 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ACOT8O14734 319 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 VILLO15195 856 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 IGHA2P01877 340 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ATP6V1B1P15313 513 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 STMN1P16949 149 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ZNF157P51786 506 aaPredicted RBP17.47■□□□□ 0.39
USB1-201ENST00000219281 CDKL1Q00532 357 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 MYBPC1Q00872 1141 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 LAMB3Q13751 1172 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ESRP1Q6NXG1 681 aaKnown RBP17.47■□□□□ 0.39
USB1-201ENST00000219281 IYDQ6PHW0 289 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 FAM35AQ86V20 835 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 LCA5Q86VQ0 697 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 IPMKQ8NFU5 416 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 DLG3Q92796 817 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 PGAP3Q96FM1 320 aaPredicted RBP17.47■□□□□ 0.39
USB1-201ENST00000219281 MPP4Q96JB8 637 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ELMO2Q96JJ3 720 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ZFP42Q96MM3 310 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 TBL1YQ9BQ87 522 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ADA2Q9NZK5 511 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 PSMD3O43242 534 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 HNRNPLP14866 589 aaKnown RBP eCLIP17.46■□□□□ 0.39
USB1-201ENST00000219281 RFTN1Q14699 578 aaPredicted RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 UGP2Q16851 508 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 SPNS2Q8IVW8 549 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 TXNDC5Q8NBS9 432 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 PCED1BQ96HM7 432 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 UBE2OQ9C0C9 1292 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 GTSE1Q9NYZ3 720 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 AK5Q9Y6K8 562 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 KCNU1A8MYU2 1149 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 SDHDO14521 159 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 PTGESO14684 152 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 RNASEH2AO75792 299 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 MYL3P08590 195 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 PTK2BQ14289 1009 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 EML3Q32P44 896 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 NADK2Q4G0N4 442 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 RWDD4Q6NW29 188 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 CNSTQ6PJW8 725 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 CNTN4Q8IWV2 1026 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 PCDH20Q8N6Y1 951 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 STON2Q8WXE9 905 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 RNF34Q969K3 372 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 SENP8Q96LD8 212 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 FICDQ9BVA6 458 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 MRPS26Q9BYN8 205 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 GRIP2Q9C0E4 1043 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 POMKQ9H5K3 350 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 OCEL1Q9H607 264 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 NMRK2Q9NPI5 230 aa17.46■□□□□ 0.39
USB1-201ENST00000219281 AAR2Q9Y312 384 aaKnown RBP17.46■□□□□ 0.39
USB1-201ENST00000219281 CCDC160A6NGH7 325 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 TRPC5OSA6NMA1 111 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 NPHS1O60500 1241 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 TNFAIP8O95379 198 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 F9P00740 461 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 DNAJB2P25686 324 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 ARNTP27540 789 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 LRPAP1P30533 357 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 RGS2P41220 211 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 ARCN1P48444 511 aaKnown RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 CXCR3P49682 368 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 MAP7Q14244 749 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 RAB41Q5JT25 222 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 AHI1Q8N157 1196 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 TMEM102Q8N9M5 508 aaPredicted RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 CEP70Q8NHQ1 597 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 HEXDCQ8WVB3 486 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 TSPAN18Q96SJ8 248 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 PRPF18Q99633 342 aaKnown RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 MRPL1Q9BYD6 325 aaKnown RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 RHOBTB2Q9BYZ6 727 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 MRPL46Q9H2W6 279 aaKnown RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 NCKIPSDQ9NZQ3 722 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 PDCD11Q14690 1871 aaKnown RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 SHROOM3Q8TF72 1996 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 NUP205Q92621 2012 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 NEMP2A6NFY4 417 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 TRIM38O00635 465 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 ARSAP15289 507 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 DNAJB1P25685 340 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 SLC1A2P43004 574 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 IL23RQ5VWK5 629 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 ZNF280DQ6N043 979 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 TRIM67Q6ZTA4 783 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 ARHGAP22Q7Z5H3 698 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 PPHLN1Q8NEY8 458 aaKnown RBP17.45■□□□□ 0.38
USB1-201ENST00000219281 ATP6V1E2Q96A05 226 aa17.45■□□□□ 0.38
USB1-201ENST00000219281 MAELQ96JY0 434 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms