RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GPAMQ9HCL2 828 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 GNEQ9Y223 722 aaKnown RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 FAM50BQ9Y247 325 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 USP34Q70CQ2 3546 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 F8W8V4 182 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 J3KR12 359 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 PAGE1O75459 146 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 DAB1O75553 588 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 GRK4P32298 578 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 PBX3P40426 434 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 CDH17Q12864 832 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 PPIL2Q13356 520 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 DPYSQ14117 519 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 FAM83EQ2M2I3 478 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 ANO4Q32M45 955 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 TBC1D25Q3MII6 688 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 CFAP52Q8N1V2 620 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 PQLC1Q8N2U9 271 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 DQX1Q8TE96 717 aaKnown RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 ERLEC1Q96DZ1 483 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 KLHL32Q96NJ5 620 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 SOX17Q9H6I2 414 aaPredicted RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 LZTS1Q9Y250 596 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 E7ENX8 843 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 PDLIM1O00151 329 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 HNRNPRO43390 633 aaKnown RBP15.24■□□□□ 0.03
EFNB1-201ENST00000204961 GRID2O43424 1007 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 THP07101 528 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 DSC2Q02487 901 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 UBXN11Q5T124 520 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 HNRNPABQ99729 332 aaKnown RBP15.24■□□□□ 0.03
EFNB1-201ENST00000204961 VCX3BQ9H321 246 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 NOL11Q9H8H0 719 aaKnown RBP15.24■□□□□ 0.03
EFNB1-201ENST00000204961 OXSMQ9NWU1 459 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 NRCAMQ92823 1304 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 ALDH1A2O94788 518 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 DDHD2O94830 711 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 HLA-DQB2P05538 268 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 SBK3P0C264 359 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 THRAP10827 490 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 CCR1P32246 355 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 ZDHHC17Q8IUH5 632 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 ZNF512Q96ME7 567 aaPredicted RBP15.24■□□□□ 0.03
EFNB1-201ENST00000204961 TBL1YQ9BQ87 522 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 CENPKQ9BS16 269 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 C11orf84Q9BUA3 381 aaPredicted RBP15.24■□□□□ 0.03
EFNB1-201ENST00000204961 FBXW11Q9UKB1 542 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 COMMD10Q9Y6G5 202 aa15.24■□□□□ 0.03
EFNB1-201ENST00000204961 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.03
EFNB1-201ENST00000204961 AKAP10O43572 662 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CD52P31358 61 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 YBX1P67809 324 aaKnown RBP15.23■□□□□ 0.03
EFNB1-201ENST00000204961 EFEMP1Q12805 493 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 SLC5A9Q2M3M2 681 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 LINC01465Q8N7H1 131 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 ACTRT2Q8TDY3 377 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 SNRNP27Q8WVK2 155 aaKnown RBP15.23■□□□□ 0.03
EFNB1-201ENST00000204961 ANKRD49Q8WVL7 239 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 TEKT5Q96M29 485 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 SPON2Q9BUD6 331 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 ABHD16BQ9H3Z7 469 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 PREBQ9HCU5 417 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 VTA1Q9NP79 307 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 NCKIPSDQ9NZQ3 722 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 EVLQ9UI08 416 aaPredicted RBP15.23■□□□□ 0.03
EFNB1-201ENST00000204961 SLC27A5Q9Y2P5 690 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 RGSL1A5PLK6 1076 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 NR5A2O00482 541 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 XPOTO43592 962 aaKnown RBP15.23■□□□□ 0.03
EFNB1-201ENST00000204961 RNASEH2AO75792 299 aaKnown RBP15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CNTFP26441 200 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 GLUD2P49448 558 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 PSEN2P49810 448 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 C1QTNF8P60827 252 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 GALNT3Q14435 633 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CASP10Q92851 521 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 OLFM1Q99784 485 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
EFNB1-201ENST00000204961 PDP2Q9P2J9 529 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 THEGQ9P2T0 379 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 FBXO5Q9UKT4 447 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 TIMM22Q9Y584 194 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 HACD1B0YJ81 288 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 PFDN1O60925 122 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CNTN5O94779 1100 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CRTAMO95727 393 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CLPTM1O96005 669 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 CRABP2P29373 138 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 THPOP40225 353 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 KCNC1P48547 511 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 LIPMQ5VYY2 423 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 STEAP4Q687X5 459 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 NAPEPLDQ6IQ20 393 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 ZNF410Q86VK4 478 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 FAM81AQ8TBF8 368 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 HDAC10Q969S8 669 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms