RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Eml5Q8BQM8 1977 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Pias1O88907 651 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Creb1Q01147 341 aaKnown RBP21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Tex35Q14BK3 207 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Cd300lgQ1ERP8 331 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Garnl3Q3V0G7 1038 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Tead4Q62296 427 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Q6PAC4 1279 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Q8BWG4 1187 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Thop1Q8C1A5 687 aaKnown RBP21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 CherpQ8CGZ0 936 aaKnown RBP21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Cplx3Q8R1B5 158 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Ppp1r16aQ923M0 524 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Psma8Q9CWH6 250 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Rfwd2Q9R1A8 733 aaKnown RBP21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Htatip2Q9Z2G9 242 aa21.44■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Igkv5-39A0A0G2JDV4 115 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Cilp2D3Z7H8 1162 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 RargP18911 458 aaKnown RBP21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Prdx3P20108 257 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Ces1cP23953 554 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 SmoP56726 793 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Ripk2P58801 539 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 UtyP79457 1212 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gjb5Q02739 271 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Sox9Q04887 507 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gbp8Q2V6D6 525 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Taar7eQ5QD09 358 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 H2-M10.2Q85ZW9 329 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Art3Q8R2G4 371 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Lrrc14Q8VC16 493 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Nxnl1Q8VC33 217 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Retreg3Q9CQV4 466 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Vps28Q9D1C8 221 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Akap5D3YVF0 745 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Mcpt4P21812 246 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Asgr1P34927 284 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 CskP41241 450 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Arf5P84084 180 aaKnown RBP21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Dact3Q0PHV7 610 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 HecaQ3V1N5 544 aaKnown RBP21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Serpinb6Q60854 378 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Olfr533Q7TRT7 320 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Trip10Q8CJ53 603 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Ints9Q8K114 658 aaKnown RBP21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Acad10Q8K370 1069 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 GrpQ8R1I2 146 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Mccc1Q99MR8 717 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Serbp1Q9CY58 407 aaKnown RBP21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Commd8Q9CZG3 183 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Mgat4dQ9D4R2 373 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Hes6Q9JHE6 224 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Cyth1Q9QX11 398 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 GgcxQ9QYC7 757 aa21.43■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Itga9B8JK39 1036 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Foxm1O08696 760 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Plk2P53351 682 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Slc17a7Q3TXX4 560 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 BadQ61337 204 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Dll1Q61483 722 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Plk4Q64702 925 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Pcid2Q8BFV2 399 aaKnown RBP21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Zfp595Q8BIN6 625 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Klhl38Q8BSF5 581 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 AopepQ8BXQ6 817 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Rps6kl1Q8R2S1 544 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Sh3kbp1Q8R550 709 aaKnown RBP21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Tcaf2Q921K8 919 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Sfxn1Q99JR1 322 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Sept6Q9R1T4 434 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Mcm3apQ9WUU9 1971 aa21.42■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Rpl21O09167 160 aaKnown RBP21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 NmbrO54799 390 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Crabp2P22935 138 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 SpertQ32MG2 446 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Tmem120bQ3TA38 339 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Fam83fQ3UKU4 495 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Galnt10Q6P9S7 603 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Bcas1Q80YN3 633 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Arhgap25Q8BYW1 648 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Slc39a13Q8BZH0 361 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Btbd9Q8C726 612 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Samd7Q8C8Y5 445 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Glcci1Q8K3I9 537 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Fam129bQ8R1F1 749 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Alg9Q8VDI9 611 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Slc35f6Q8VE96 372 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 CatsperzQ9CQP8 194 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 IkbipQ9DBZ1 373 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Clcn2Q9R0A1 908 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Dio2Q9Z1Y9 266 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gm13089A2AGW7 455 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gm5936A2BG95 728 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gm5640A3KG49 728 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gm3259D3YUK0 475 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gm8257E9Q8R3 264 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Nsmce4aG3XA30 381 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Vmn2r54K7N649 806 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Clcn6O35454 870 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Slc27a2O35488 620 aa21.41■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms