RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Slc39a13Q8BZH0 361 aa18.54■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Rpl17Q9CPR4 184 aaKnown RBP18.54■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Ergic2Q9CR89 377 aa18.54■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Dlc1Q9R0Z9 1092 aa18.54■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Lmo2P25801 158 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Cyp3a11Q64459 504 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Map4k3Q99JP0 894 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 MispQ9D279 648 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gm13089A2AGW7 455 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 EXOC1LB9EK06 172 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Brms1lQ3U1T3 323 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Naif1Q6PFD7 327 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Zdhhc14Q8BQQ1 489 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Trap1Q9CQN1 706 aaKnown RBP18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gm4450E9Q007 373 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Rnf169E9Q7F2 694 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Ncam2O35136 837 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 LtfP08071 707 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 MaptP10637 733 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Zbtb2Q3V3W4 514 aaKnown RBP18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Hsd3b4Q61767 373 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Kirrel3Q8BR86 778 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Slc35f5Q8R314 524 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Mcrs1Q99L90 462 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 C5P06684 1680 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Clip3B9EHT4 547 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gm17093F6XGJ4 214 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Speer4eK7N6S8 255 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Hk2O08528 917 aaKnown RBP18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 CochQ62507 552 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Atp2c1Q80XR2 918 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Ifit3Q64345 403 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Xpnpep1Q6P1B1 623 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Asb14Q8C6Y6 587 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Hectd2Q8CDU6 774 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Dcp2Q9CYC6 422 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Ddx21Q9JIK5 851 aaKnown RBP18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Zbtb12Q9Z150 459 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gria4Q9Z2W8 902 aa18.53■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gm6811E9Q3Y8 510 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Pknox1O70477 436 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Lamp2P17047 415 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Epha3P29319 983 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 BtrcQ3ULA2 605 aaKnown RBP18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gstt1Q64471 240 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Cpa4Q6P8K8 420 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Mettl21cQ8BLU2 248 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Zfp263Q8CF60 680 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Colec12Q8K4Q8 742 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Clptm1Q8VBZ3 664 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Oser1Q9D722 291 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gpc1Q9QZF2 557 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gm10354K7N6A0 256 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Kansl1lQ5DTI6 991 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Xkr9Q5GH62 373 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 TdrpQ8C5P7 182 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Hist1h2aaQ8CGP4 129 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Prrg2Q8R182 198 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Mgat5Q8R4G6 740 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Plbd1Q8VCI0 550 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Pdk3Q922H2 415 aaKnown RBP18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Serpinb9bQ9DAV6 377 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 AcadsbQ9DBL1 432 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Cacng4Q9JJV4 327 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Gm8237E9Q257 205 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 AprtP08030 180 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Rbm44Q3V089 1013 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Traf3Q60803 567 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Q8BH50 245 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 DseQ8BLI4 958 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Sfr1Q8BP27 319 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Nae1Q8VBW6 534 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Ssxb1Q9CPU1 170 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Spatc1lQ9D9W0 342 aa18.52■□□□□ 0.56
Scaf11-201ENSMUST00000047835 Ccr5P51682 354 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Rab10P61027 200 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Acsbg2Q2XU92 667 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Gdpd4Q3TT99 632 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Cyp2j13Q3UNV4 503 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Syn2Q64332 586 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Eif2s1Q6ZWX6 315 aaKnown RBP18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Mapk8Q91Y86 384 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 EbplQ9D0P0 206 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Clcn5Q9WVD4 746 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Padi3Q9Z184 664 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Itsn1Q9Z0R4 1714 aa18.52■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Mon2Q80TL7 1715 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Phlpp1Q8CHE4 1687 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 D3Z070 196 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Adamts10P58459 1104 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 CrtamQ149L7 389 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 BC030870Q3V2G4 71 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Nab1Q61122 486 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Abcd2Q61285 741 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Awat2Q6E1M8 333 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Znf280cQ6P3Y5 742 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Tmc7Q8C428 726 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Mark1Q8VHJ5 795 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Fam151bD3YUE4 279 aa18.51■□□□□ 0.55
Scaf11-201ENSMUST00000047835 Gm17615E9Q9P2 165 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms