RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Zfp623Q9CY99 499 aa11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Zfp655Q9CZP3 541 aaKnown RBP11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 2010109A12RikQ9D875 119 aa11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tsga13Q9DA17 273 aa11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Stk32bQ9JJX8 414 aa11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Msl3Q9WVG9 525 aa11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cacna1fQ9JIS7 1985 aa11.44□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ptpn3A2ALK8 913 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mknk1O08605 427 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 C2P21180 760 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Kcnj2P35561 428 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 TgfbiP82198 683 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 AcdQ5EE38 416 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Eif2s1Q6ZWX6 315 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tex13c3Q810P0 219 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Klhl42Q8BFQ9 493 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Q8BP99 230 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Sgpl1Q8R0X7 568 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ankrd49Q8VE42 238 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Snx9Q91VH2 595 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Kdm4bQ91VY5 1086 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pcdha11Q91Y19 950 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Arhgef25Q9CWR0 618 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pbld2Q9CXN7 288 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam83dQ9D7I8 585 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ddx21Q9JIK5 851 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Actl7aQ9QY84 440 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hs6st1Q9QYK5 411 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Twf2Q9Z0P5 349 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mtm1Q9Z2C5 603 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cntnap1O54991 1385 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hsd17b7O88736 334 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc2a4P14142 509 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Kcna2P63141 499 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ly9Q01965 654 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Sh3bp2Q06649 559 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cyp2j13Q3UNV4 503 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ei24Q61070 340 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dlx3Q64205 287 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rundc3bQ6PDC0 408 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Clec18aQ7TSQ1 534 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rbm22Q8BHS3 420 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Plekha4Q8VC98 588 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Oas1dQ8VI95 361 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ubap2Q91VX2 1132 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc22a7Q91WU2 540 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Atpaf2Q91YY4 289 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gins4Q99LZ3 223 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gtf2ird2Q99NI3 936 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Bbs2Q9CWF6 721 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Map3k20Q9ESL4 802 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Arap2Q8BZ05 1703 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mical3Q8CJ19 1993 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Vmn2r65G3X931 845 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Sypl2O89104 264 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Lamp2P17047 415 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Lmo2P25801 158 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Shcbp1lQ3TTP0 639 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tespa1Q3U132 458 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 P2rx3Q3UR32 397 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cfap52Q5F201 620 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Casc4Q6P2L7 435 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Sgo2Q7TSY8 1164 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tma7Q8K003 64 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 CarfQ8VHI4 689 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ska2Q9CR46 120 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 FAM186AQ9D9R9 1790 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Skint1A7TZE6 364 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Per3O70361 1113 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Clec2lP0C7M9 211 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mcpt1P11034 246 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 C1qbP14106 253 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Sipa1P46062 1037 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam83fQ3UKU4 495 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Adora2bQ60614 332 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tas2r115Q7M719 310 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc36a3Q811P0 477 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rnf138rt1Q9D9M9 248 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tmem174Q9DCX7 243 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hipk3Q9ERH7 1192 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slamf1Q9QUM4 343 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc7a8Q9QXW9 531 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ltbp2O08999 1813 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 NficP70255 439 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dnal1Q05A62 190 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gpatch4Q3TFK5 415 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Trafd1Q3UDK1 580 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ints7Q7TQK1 966 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gpr141Q7TQP0 305 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Adgrg2Q8CJ12 1009 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Exd2Q8VEG4 650 aaKnown RBP11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 IrgqQ8VIM9 583 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dppa5aQ9CQS7 118 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Agpat3Q9D517 376 aa11.43□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm6509A0A0J9YUV1 481 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Erich1E9PY43 332 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm6351K9J7D1 481 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 KlO35082 1014 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 H2-Eb1P04230 264 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hspa1bP17879 642 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms