RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Gm44G3UW88 330 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 CrymO54983 313 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 March5Q3KNM2 278 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Zscan26Q5RJ54 466 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Krt32Q62168 407 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Mvb12bQ6KAU4 317 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Scaf4Q6PFF0 1209 aaKnown RBP20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Fam181bQ80VF6 417 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Adnp2Q8CHC8 1165 aaKnown RBP20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Plekha4Q8VC98 588 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Tfap2dQ91ZK0 452 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 GhdcQ99J23 532 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Nmd3Q99L48 503 aaKnown RBP20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Lysmd3Q99LE3 305 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Cacng3Q9JJV5 315 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 M1apQ9Z0E1 529 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Olfr1049A2ARZ0 308 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Ttll11A4Q9F4 727 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Gm11236J3QMS7 360 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Gm14496K7N5U4 849 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Rpl10aP53026 217 aaKnown RBP20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Bpifa6Q0VGU8 367 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Shkbp1Q6P7W2 704 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Ppp6r2Q8R3Q2 923 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 ChiaQ91XA9 473 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Glra3Q91XP5 464 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Agpat3Q9D517 376 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Ppp2r3cQ9JK24 453 aa20.41■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Prim2P33610 505 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Mib1Q80SY4 1006 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Ofcc1Q8BGX4 166 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Tbc1d17Q8BYH7 645 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Gtse1Q8R080 741 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Eml3Q8VC03 897 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Slc35c2Q8VCX2 364 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Olfr348Q8VGK3 313 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Pcdha6Q91Y14 946 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Fbxo32Q9CPU7 355 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Ctbp1O88712 441 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Alox12eP55249 662 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Slc16a9Q7TM99 508 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Rbm22Q8BHS3 420 aaKnown RBP20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Znf473Q8BI67 892 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Smoc2Q8CD91 447 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Snx15Q91WE1 337 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 B3galt6Q91Z92 325 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Homer3Q99JP6 356 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Dok4Q99KE3 325 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 NwcQ9CQI4 244 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Tmem53Q9D0Z3 276 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Efcab9Q9DAM2 216 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Tle6Q9WVB3 581 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Top3bQ9Z321 862 aaKnown RBP20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Nlrc5C3VPR6 1915 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Tcp11x2A2AEI7 503 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Aldoart1A6ZI46 419 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Znf683I7HJS4 458 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Lrrc23O35125 340 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Fgf10O35565 209 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Adcyap1r1P70205 496 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Eml1Q05BC3 814 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Fzd6Q61089 709 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Abcd2Q61285 741 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Atp2a3Q64518 1038 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 ScapQ6GQT6 1276 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Efr3bQ6ZQ18 817 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Slc18a2Q8BRU6 517 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Clic5Q8BXK9 251 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Pofut2Q8VHI3 429 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Klhdc8bQ9D2D9 354 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 LrgukQ9D5S7 820 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Slc29a1Q9JIM1 460 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Trpc4Q9QUQ5 974 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Sept5Q9Z2Q6 369 aa20.4■□□□□ 0.86
Ctdsp1-201ENSMUST00000027367 Kifc3O35231 824 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Oas1aP11928 367 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Lhx3P50481 400 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Hsdl2Q2TPA8 490 aaKnown RBP20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Ccdc61Q3UJV1 511 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Q3UK37 420 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Gm4981Q3ULJ8 291 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Olfr464Q5SW48 313 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Gpr142Q7TQN9 365 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Zfp398Q8BV16 643 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Oas1gQ8K469 367 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Gspt1Q8R050 636 aaKnown RBP20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 SarafQ8R3Q0 334 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Neurl2Q9D0S4 285 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Cab39lQ9DB16 337 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 ClcnkbQ9WUB6 687 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 MycsQ9Z304 431 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Cep350E9Q309 3095 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Shroom3Q9QXN0 1986 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Rabgap1lA6H6A9 815 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Tnk2O54967 1055 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 AlplP09242 524 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 YwhaqP68254 245 aaKnown RBP20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 AxlQ00993 888 aa20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Uba1Q02053 1058 aaKnown RBP20.39■□□□□ 0.85
Ctdsp1-201ENSMUST00000027367 Klra8Q60682 266 aa20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms