RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Serbp1Q9CY58 407 aaKnown RBP17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cyp4f14Q9EP75 524 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Myo18aQ9JMH9 2050 aaKnown RBP17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Vmn2r24D3YUI0 854 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gm10721J3QPJ9 223 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Bace1P56818 501 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ctps2P70303 586 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Kir3dl2Q673W2 388 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Olfr814Q7TRH4 310 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 ChdhQ8BJ64 596 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zfp65Q91W94 390 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Txndc9Q9CQ79 226 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cntnap5aQ0V8T9 1304 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pcdh7A0A0A6YY83 1255 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ccdc62E9PVD1 701 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Galnt1O08912 559 aaKnown RBP17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 P01664 111 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 PrkcbP68404 671 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Lrig1P70193 1091 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Psme2P97372 239 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Nudt16Q6P3D0 195 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Msantd1Q8BIL2 278 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Nuak2Q8BZN4 639 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pcdha6Q91Y14 946 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Art4Q9CRA0 300 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cdyl2Q9D5D8 503 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gm44511A0A0N4SW10 223 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Hexim2Q3TVI4 313 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Plcl1Q3USB7 1096 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Lrrc8bQ5DU41 803 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zdhhc17Q80TN5 632 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Actr5Q80US4 605 aaKnown RBP17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 B430218F22RikQ8BQR5 223 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Abhd11Q8K4F5 307 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 NamptQ99KQ4 491 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rnft1Q9DCN7 395 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 MecrQ9DCS3 373 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Il23aQ9EQ14 196 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Aqp5Q9WTY4 265 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 PrebQ9WUQ2 417 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Sult2a6B2RVI8 285 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 1700011I03RikE9PYL8 271 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Plekha5E9Q6H8 1269 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Lmnb1P14733 588 aaKnown RBP17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cpne9Q1RLL3 553 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Hbq1bQ3U0A6 142 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Q6GQV0 436 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gm5414Q6IFZ8 552 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pcsk9Q80W65 694 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rdh12Q8BYK4 316 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Olfr806Q8VFI2 313 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 PglsQ9CQ60 257 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ist1Q9CX00 362 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Acbd6Q9D061 282 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Yipf5Q9EQQ2 257 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc7a8Q9QXW9 531 aa17.04■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Krt83E9Q1Y9 479 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Dpysl2O08553 572 aaKnown RBP17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zfp658Q5PPQ4 887 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 DgkqQ6P5E8 934 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Il17reQ8BH06 637 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zfp566Q8VCI1 386 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Nudt5Q9JKX6 218 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rad9aQ9Z0F6 389 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Shcbp1Q9Z179 668 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zbtb10E9Q8X5 861 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Vmn2r46L7N282 809 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Lhx8O35652 367 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 HcrtO55241 130 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Eno2P17183 434 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 InaP46660 501 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Myo1gQ5SUA5 1024 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rfx4Q7TNK1 735 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cars2Q8BYM8 551 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 DnerQ8JZM4 737 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ppp1r16bQ8VHQ3 568 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Basp1Q91XV3 226 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Fbxl20Q9CZV8 436 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Klhdc7bA0A286YD60 1263 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Obox5G3X9P6 291 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rbl1Q64701 1063 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Mgat5bQ765H6 792 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 4930503B20RikQ80ZP0 234 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rnf38Q8BI21 518 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cstf2tQ8C7E9 632 aaKnown RBP17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Wdr37Q8CBE3 496 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Prpf39Q8K2Z2 665 aa17.03■□□□□ 0.32
Ctcf-201ENSMUST00000005841 LatO54957 242 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cdh2P15116 906 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Npr1P18293 1057 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 WhammQ571B6 793 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Actr3bQ641P0 418 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Tlr12Q6QNU9 906 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Prap1Q80XD8 149 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Kank2Q8BX02 843 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ano4Q8C5H1 955 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Tcf19Q99KJ5 263 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ndufaf4Q9D1H6 173 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ift43Q9DA69 206 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Lrrc46Q9DAP0 323 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms