RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Trim14Q8BVW3 440 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mtss1Q8R1S4 759 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr532Q8VGT4 309 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 St7Q99M96 577 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ssxb1Q9CPU1 170 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ppp6cQ9CQR6 305 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc25a19Q9DAM5 318 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Timp4Q9JHB3 224 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Wdr46Q9Z0H1 622 aaKnown RBP16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Kctd18E0CZ26 429 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Fignl2J3QK54 644 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Scamp3O35609 349 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ctbp1O88712 441 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Atp5jP97450 108 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vps51Q3UVL4 782 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Armcx5Q3UZB0 606 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 CcnhQ61458 323 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tmem220Q8BP07 167 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Wwp1Q8BZZ3 918 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ppp4r1Q8K2V1 951 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 NeproQ8R2U2 564 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tmco1Q921L3 188 aaKnown RBP16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Trem1Q9JKE2 230 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 PolkQ9QUG2 852 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 CdylQ9WTK2 593 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Brca1P48754 1812 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm36028A0A0U1RPM1 299 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 ZfrO88532 1074 aaKnown RBP16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Scd1P13516 355 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc5a10Q5SWY8 596 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Caprin1Q60865 707 aaKnown RBP16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Paqr6Q6TCG5 343 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ankrd52Q8BTI7 1076 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 ThtpaQ8JZL3 224 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Agr3Q8R3W7 165 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 MiosQ8VE19 875 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Trpc7Q9WVC5 862 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cdc42ep5Q9Z0X0 150 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ice1E9Q286 2241 aaKnown RBP16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Dennd5bA2RSQ0 1274 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Psmd7P26516 321 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 WasP70315 520 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Scn2bQ56A07 215 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Sarm1Q6PDS3 724 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pdk1Q8BFP9 434 aaKnown RBP16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Nup93Q8BJ71 819 aaKnown RBP16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 GancQ8BVW0 898 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tbl3Q8C4J7 801 aaKnown RBP16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Dach2Q925Q8 634 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zcchc12Q9CZA5 402 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ifrd2Q9D8U0 441 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Plscr1Q9JJ00 328 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm6408J3QNG1 320 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm3402K7N5P2 326 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cyp2b10P12791 500 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Hspa1bP17879 642 aaKnown RBP16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Nploc4P60670 608 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pik3r6Q3U6Q4 756 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mfsd3Q5U419 412 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Hspa1aQ61696 641 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Podnl1Q6P3Y9 559 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Arhgap26Q6ZQ82 814 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Asrgl1Q8C0M9 326 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slco6c1Q8C0X7 706 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vmn1r191Q8K4D0 298 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rad51cQ924H5 366 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mapk13Q9Z1B7 366 aa16.37■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vmn2r70K7N702 854 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Agtr2P35374 363 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tbxas1P36423 533 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 YwhaqP68254 245 aaKnown RBP16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc45a4Q0P5V9 785 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ptcd3Q14C51 685 aaKnown RBP16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ankrd13bQ5F259 626 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Krt73Q6NXH9 539 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Atp6v1g3Q8BMC1 118 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cndp1Q8BUG2 492 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Serpina3nQ91WP6 418 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Clvs1Q9D4C9 354 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cdyl2Q9D5D8 503 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tbc1d21Q9D9D3 336 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gprc5dQ9JIL6 344 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mpp6Q9JLB0 553 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cntnap5aQ0V8T9 1304 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mtx3D3YTP3 312 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zfp651E9PZ11 729 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 BC024978J3QPC3 361 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 ErfP70459 551 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mpzl3Q3V3F6 237 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Xpo1Q6P5F9 1071 aaKnown RBP16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tas2r115Q7M719 310 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gprc5aQ8BHL4 356 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 TbcelQ8C5W3 424 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Celf3Q8CIN6 465 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Smap1Q91VZ6 440 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pard3bQ9CSB4 1203 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Acbd6Q9D061 282 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Agpat3Q9D517 376 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Clca1Q9D7Z6 913 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 NfkbizQ9EST8 728 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms