RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Zbed5B2RPU8 756 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Gm8113E0CXS8 587 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Adcyap1r1P70205 496 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Tial1P70318 392 aaKnown RBP18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Tmem207P86045 143 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Pitpnm3Q3UHE1 974 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Fam83fQ3UKU4 495 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Afap1l2Q5DTU0 825 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Bcar1Q61140 874 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Hspa1aQ61696 641 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Q6GQU0 248 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Scd4Q6T707 353 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ints7Q7TQK1 966 aaKnown RBP18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Olfr867Q7TRF3 331 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Olfr792Q7TRH9 311 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Catsper3Q80W99 395 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Elmo2Q8BHL5 732 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Slc45a1Q8BIV7 751 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Csnk1g1Q8BTH8 459 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Peli3Q8BXR6 445 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Zbtb6Q8K088 423 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Prrg2Q8R182 198 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Dus2Q9D7B1 493 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Doc2gQ9ESN1 387 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Slfn2Q9Z0I6 378 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Cdc42ep5Q9Z0X0 150 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Fbln2P37889 1221 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ncf4P97369 339 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 MylpfP97457 169 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Rnf157Q3TEL6 685 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Lsmem1Q3UQS2 128 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Six4Q61321 775 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Podnl1Q6P3Y9 559 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Sarm1Q6PDS3 724 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Fads6Q80UG1 342 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Nup93Q8BJ71 819 aaKnown RBP18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Sik2Q8CFH6 931 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Nol6Q8R5K4 1152 aaKnown RBP18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 OscarQ8VBT3 265 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Mtif2Q91YJ5 727 aaKnown RBP18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Rgs10Q9CQE5 181 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 P2yr13Q9D8I2 337 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Msgn1Q9JK54 188 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 NbnQ9R207 751 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Msl3Q9WVG9 525 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Cd320Q9Z1P5 260 aa18.93■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Gm10717D3Z1I8 228 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Vmn1r76F8VQ63 324 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Clec4fP70194 548 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Zfp217Q3U0X6 1041 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Foxred2Q3USW5 665 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Armcx5Q3UZB0 606 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 MafkQ61827 156 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ggnbp1Q6K1E7 370 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 HltfQ6PCN7 1003 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Cept1Q8BGS7 416 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Traf3ip2Q8N7N6 555 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Sgpl1Q8R0X7 568 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Pcdhb11Q91UZ8 797 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 B4galt4Q9JJ04 344 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ap4s1Q9WVL1 144 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Olfr596F8VQ26 312 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Akain1G3UWD5 69 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Psma3O70435 255 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 AdprhP54923 362 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ptpn14Q62130 1189 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 DazlQ64368 298 aaKnown RBP18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Rslcan18Q7M6X5 460 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Polr2eQ80UW8 210 aaKnown RBP18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 GrpQ8R1I2 146 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Pex19Q8VCI5 299 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Atp6v1b1Q91YH6 513 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Tma16Q9CR02 221 aaKnown RBP18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Syde1Q9DBZ9 737 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Trim54Q9ERP3 366 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Trpc4Q9QUQ5 974 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Psmd13Q9WVJ2 376 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Dennd4aE9Q8V6 1869 aa18.92■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Wdr49A0A0N4SUK7 710 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Tmem245B1AZA5 876 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Vmn2r27D3YUK6 857 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 2610028H24RikG5E8K1 270 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Sema3aO08665 772 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Cldn5O54942 218 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Anxa5P48036 319 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Rabl6Q5U3K5 725 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Lrfn2Q80TG9 788 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 TdrkhQ80VL1 560 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Nmur2Q8BZ39 395 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Parp9Q8CAS9 866 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Sbk1Q8QZX0 417 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Fbxo21Q8VDH1 627 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 DtnaQ9D2N4 746 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 EtfbQ9DCW4 255 aaKnown RBP18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Shroom3Q9QXN0 1986 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 JhyE9Q793 770 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Klhl33G3UW92 533 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 OmdO35103 423 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Tsta3P23591 321 aa18.91■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 GemP55041 295 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms