RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tbc1d22aQ8R5A6 516 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Mtfr1Q99MB2 328 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Sike1Q9CPR7 207 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Acot13Q9CQR4 140 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Ifrd2Q9D8U0 441 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Syde1Q9DBZ9 737 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 CrotQ9DC50 612 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Wfdc1Q9ESH5 211 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Il17rbQ9JIP3 499 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Chek2Q9Z265 546 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 PtprfA2A8L5 1898 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Shroom3Q9QXN0 1986 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f15A0A087WR44 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f12A0A0A0MQP3 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm5485A0A1D5RM98 91 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f9A2BFZ7 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f7A2BHG6 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f19A2CG71 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f10A2CG92 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f3A2CGC2 496 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f13B8JKF6 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Erich2E9Q1A6 463 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Zbtb10E9Q8X5 861 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr292F8VQ84 308 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f2J3QMS5 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f25J3QMV9 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f6J3QMW9 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f26J3QNK2 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f24J3QNQ5 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f8J3QQ50 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f17L7MU81 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f18L7MU83 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 PpargP37238 505 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f14Q1LZI5 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Gsdmc2Q2KHK6 480 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Treml2Q2LA85 329 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Trafd1Q3UDK1 580 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Btbd35f27Q5FWA1 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Abcg2Q7TMS5 657 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Rnf38Q8BI21 518 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Rmdn2Q8BSE0 410 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Nlrp4bQ8C6J9 863 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Asb14Q8C6Y6 587 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Gsdmc3Q8CB12 480 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Nkiras1Q8CEC5 192 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Serpinb10Q8K1K6 397 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Unc93b1Q8VCW4 598 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Zfp617Q91WM0 559 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 GMCL1P1Q99N64 498 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 DenrQ9CQJ6 198 aaKnown RBP16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 RecqlQ9Z129 648 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Sbf1Q6ZPE2 1867 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Trbv4A0A075B5I2 113 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm8113E0CXS8 587 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 MutP16332 748 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Apobec1P51908 229 aaKnown RBP16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Kir3dl1P83555 432 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Fscn1Q61553 493 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Krt32Q62168 407 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Best2Q8BGM5 508 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Hip1Q8VD75 1029 aaKnown RBP16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Dhrs7bQ99J47 323 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Haus8Q99L00 373 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 LiasQ99M04 373 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Abcg3Q99P81 650 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Upk1aQ9D132 257 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Cyp4v2Q9DBW0 525 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Stk19Q9JHN8 254 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Cldn24D3YXJ9 220 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Dsg3O35902 993 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Ptger1P35375 405 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Cd86P42082 309 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 PuraP42669 321 aaKnown RBP16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Itga11P61622 1188 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Adcyap1r1P70205 496 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Atp5jP97450 108 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 MylpfP97457 169 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr1037Q7TR84 321 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 DdnQ80TS7 710 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 ChfrQ810L3 664 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 DseQ8BLI4 958 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Psd4Q8BLR5 1005 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Tmtc3Q8BRH0 920 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Anapc2Q8BZQ7 837 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 VasnQ9CZT5 673 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Dus2Q9D7B1 493 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 EtfbQ9DCW4 255 aaKnown RBP16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Cyp3a41aQ9JMA7 504 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Apobec2Q9WV35 224 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Ap4s1Q9WVL1 144 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm6370A0A0G2JGX9 315 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Trim5E9PV98 497 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm6408J3QNG1 320 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm3402K7N5P2 326 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm6309L7N481 315 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 NfkbieO54910 364 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Htr2cP34968 459 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Gpr174Q3U507 335 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 TceancQ3US16 359 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Mpp4Q6P7F1 635 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms