RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 LRRC40Q9H9A6 602 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 PDFQ9HBH1 243 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 ATP13A1Q9HD20 1204 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 NT5MQ9NPB1 228 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 GOLGA6AQ9NYA3 693 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 UBP1Q9NZI7 540 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 AAR2Q9Y312 384 aaKnown RBP13.32□□□□□ -0.28
PHGDH-221ENST00000641573 NUP205Q92621 2012 aa13.32□□□□□ -0.28
PHGDH-221ENST00000641573 STK25O00506 426 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 PI15O43692 258 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 RNF40O75150 1001 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 CPP00450 1065 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 PHBP35232 272 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ETFBP38117 255 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 NUMBP49757 651 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 GEMP55040 296 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ITKQ08881 620 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 USP4Q13107 963 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 STAT4Q14765 748 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ZNF77Q15935 545 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 TTMPQ5BVD1 217 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 FSCBQ5H9T9 825 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ATAT1Q5SQI0 421 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ZC3H14Q6PJT7 736 aaKnown RBP13.31□□□□□ -0.28
PHGDH-221ENST00000641573 POTEHQ6S545 545 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 CROCCP2Q86T23 111 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 SPATA22Q8NHS9 363 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 RIN3Q8TB24 985 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
PHGDH-221ENST00000641573 LRRC39Q96DD0 335 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 CFAP36Q96G28 342 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 CCDC77Q9BR77 488 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ROPN1BQ9BZX4 212 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-221ENST00000641573 SLC25A51Q9H1U9 297 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 ROPN1Q9HAT0 212 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-221ENST00000641573 CASS4Q9NQ75 786 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 MYO10Q9HD67 2058 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 FRYLO94915 3013 aa13.31□□□□□ -0.28
PHGDH-221ENST00000641573 TLDC2A0PJX2 215 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 SDR42E2A6NKP2 422 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 SMIM23A6NLE4 172 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 RASGRF2O14827 1237 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 USP12O75317 370 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 TCEA3O75764 348 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 CYBBP04839 570 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 IVLP07476 585 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 TCF3P15923 654 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 GLDCP23378 1020 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MGAT1P26572 445 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MZF1P28698 734 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 SSTR1P30872 391 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 CSKP41240 450 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 SESN2P58004 480 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MAXP61244 160 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 NIPAL4Q0D2K0 466 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 OLIG2Q13516 323 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 CDH18Q13634 790 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 ZNF235Q14590 738 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 LONRF1Q17RB8 773 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MPP7Q5T2T1 576 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 TPGS1Q6ZTW0 290 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 C3orf62Q6ZUJ4 267 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 ARID3BQ8IVW6 561 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 CCDC117Q8IWD4 279 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MPP5Q8N3R9 675 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 PGBD5Q8N414 524 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 OR52K1Q8NGK4 314 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 BHMTQ93088 406 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 IMP4Q96G21 291 aaKnown RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 EBNA1BP2Q99848 306 aaKnown RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 PIH1D1Q9NWS0 290 aaKnown RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 BCCIPQ9P287 314 aaKnown RBP eCLIP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 UBA2Q9UBT2 640 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 ZC3H7BQ9UGR2 993 aaKnown RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 MAD1L1Q9Y6D9 718 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 SHROOM3Q8TF72 1996 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 NOTCH4Q99466 2003 aa13.3□□□□□ -0.28
PHGDH-221ENST00000641573 TPRP12270 2363 aaKnown RBP13.3□□□□□ -0.28
PHGDH-221ENST00000641573 ACACBO00763 2458 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 CBX4O00257 560 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 POLR3GO15318 223 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-221ENST00000641573 PMPCBO75439 489 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 SPAG6O75602 509 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-221ENST00000641573 GSTA2P09210 222 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 FSHRP23945 695 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 WEE1P30291 646 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 MPP3Q13368 585 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 TDGQ13569 410 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 FYB2Q5VWT5 728 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 RNF43Q68DV7 783 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 NAPEPLDQ6IQ20 393 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 GPR149Q86SP6 731 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 LINC00523Q86TU6 105 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 PRPF39Q86UA1 669 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms