RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PDE1CQ14123 709 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 FZD2Q14332 565 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 RTP5Q14D33 572 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 ACBD5Q5T8D3 534 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 NLRP14Q86W24 1093 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 DCBLD1Q8N8Z6 715 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 ZNF548Q8NEK5 533 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 FAM172AQ8WUF8 416 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 RFFLQ8WZ73 363 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 TBC1D31Q96DN5 1066 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 BMFQ96LC9 184 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 NLGN3Q9NZ94 848 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 U3KQA8 63 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 SMG1Q96Q15 3661 aaKnown RBP16.98■□□□□ 0.31
PHGDH-213ENST00000641272 IGLON5A6NGN9 336 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 C2CD4BA6NLJ0 364 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 C16orf96A6NNT2 1141 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 RAMP2O60895 175 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 PRB1P04280 392 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 CKMT1AP12532 417 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 RHOQP17081 205 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 ADRA1BP35368 520 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 MAPKAPK2P49137 400 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 HDAC4P56524 1084 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 JAM2P57087 298 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 ARL13BQ3SXY8 428 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 CRTC1Q6UUV9 634 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 PARGQ86W56 976 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 ZNF677Q86XU0 584 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 RBFAQ8N0V3 343 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 PYROXD2Q8N2H3 581 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 ARHGEF2Q92974 986 aaKnown RBP16.98■□□□□ 0.31
PHGDH-213ENST00000641272 NAF1Q96HR8 494 aaKnown RBP16.98■□□□□ 0.31
PHGDH-213ENST00000641272 PCDHB18PQ96TA0 734 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 OSBPL2Q9H1P3 480 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 GPR27Q9NS67 375 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 SEPT11Q9NVA2 429 aaKnown RBP16.98■□□□□ 0.31
PHGDH-213ENST00000641272 TMEM248Q9NWD8 314 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 RAI2Q9Y5P3 530 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 SHROOM3Q8TF72 1996 aa16.98■□□□□ 0.31
PHGDH-213ENST00000641272 K7ESM1 405 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 RRP8O43159 456 aaKnown RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 OPA1O60313 960 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 MPOP05164 745 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 ETFBP38117 255 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 SLC20A2Q08357 652 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 PTP4A2Q12974 167 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 POLD3Q15054 466 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 CDKN3Q16667 212 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 DEFB133Q30KQ1 61 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 FKBP15Q5T1M5 1219 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 CDKAL1Q5VV42 579 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 ARCQ7LC44 396 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 OR2AP1Q8NGE2 309 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 SNIP1Q8TAD8 396 aaKnown RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 IFI44Q8TCB0 444 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 BAP1Q92560 729 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 FEM1CQ96JP0 617 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 KLHL32Q96NJ5 620 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 FCRL3Q96P31 734 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 TCEAL2Q9H3H9 227 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 IPO11Q9UI26 975 aaKnown RBP16.97■□□□□ 0.31
PHGDH-213ENST00000641272 KLF15Q9UIH9 416 aa16.97■□□□□ 0.31
PHGDH-213ENST00000641272 LRRK1Q38SD2 2015 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 PTPRQQ9UMZ3 2332 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 H3BM21 787 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 FPGTO14772 594 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 CCP110O43303 1012 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 AP1G1O43747 822 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 CSO75390 466 aaKnown RBP16.96■□□□□ 0.31
PHGDH-213ENST00000641272 TMCC1O94876 653 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 GSRP00390 522 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-213ENST00000641272 NME1P15531 152 aaKnown RBP16.96■□□□□ 0.31
PHGDH-213ENST00000641272 ITIH2P19823 946 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 GPD1P21695 349 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 IGFALSP35858 605 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 PTPN9P43378 593 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 NSFP46459 744 aaKnown RBP16.96■□□□□ 0.31
PHGDH-213ENST00000641272 RABIFP47224 123 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 HNRNPKP61978 463 aaKnown RBP eCLIP16.96■□□□□ 0.313e-7■□□□□ 8.5
PHGDH-213ENST00000641272 E2F1Q01094 437 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 NRG1Q02297 640 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-213ENST00000641272 SGCGQ13326 291 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 SYCP1Q15431 976 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 TCEA2Q15560 299 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 TBC1D25Q3MII6 688 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 ZNF805Q5CZA5 627 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 GUSBP11Q6P575 273 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 STRADAQ7RTN6 431 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 VPS36Q86VN1 386 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 LMX1AQ8TE12 382 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 EXOC2Q96KP1 924 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 KLF6Q99612 283 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-213ENST00000641272 SELENOOQ9BVL4 669 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 KLC2Q9H0B6 622 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 ADAM22Q9P0K1 906 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 HPCAL4Q9UM19 191 aa16.96■□□□□ 0.31
PHGDH-213ENST00000641272 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms