RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 FAM86C1Q9NVL1 165 aa8.36□□□□□ -1.07
NECAP1-227ENST00000640648 MAT2BQ9NZL9 334 aa8.36□□□□□ -1.07
NECAP1-227ENST00000640648 NDUFAF4Q9P032 175 aa8.36□□□□□ -1.07
NECAP1-227ENST00000640648 NKX1-2Q9UD57 310 aaPredicted RBP8.36□□□□□ -1.07
NECAP1-227ENST00000640648 SUGT1Q9Y2Z0 365 aa8.36□□□□□ -1.07
NECAP1-227ENST00000640648 K7EPI3 171 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 RECQL5O94762 991 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SOX30O94993 753 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 IL1BP01584 269 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 CLUP10909 449 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 LCP1P13796 627 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 GYS1P13807 737 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 RAB5BP61020 215 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 FRG1Q14331 258 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TIGD2Q4W5G0 525 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 UNC5BQ8IZJ1 945 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 POU5F2Q8N7G0 328 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 VGLL2Q8N8G2 317 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 OR8K5Q8NH50 307 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 FEZF2Q8TBJ5 459 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 MYLPFQ96A32 169 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 CENPNQ96H22 339 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 DNAJC1Q96KC8 554 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 RACGAP1Q9H0H5 632 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 CFL2Q9Y281 166 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 H3BMM5 538 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SERPINB7O75635 380 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SNAP29O95721 258 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ADRA2BP18089 450 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 FGFR3P22607 806 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ARPP19P56211 112 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 YWHAHQ04917 246 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ZNF517Q6ZMY9 492 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 KBTBD2Q8IY47 623 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TBC1D19Q8N5T2 526 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TBC1D15Q8TC07 691 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SLC35C1Q96A29 364 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ISOC1Q96CN7 298 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 AP2M1Q96CW1 435 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 FAM167AQ96KS9 214 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SIK2Q9H0K1 926 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 RIOX1Q9H6W3 641 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 PRDM5Q9NQX1 630 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ERAP1Q9NZ08 941 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 NCKIPSDQ9NZQ3 722 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 EIF3FO00303 357 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ALOX15BO15296 676 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TCN1P20061 433 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 BST2Q10589 180 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 MIIPQ5JXC2 388 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ANKRD26P1Q6NSI1 321 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TMEM26Q6ZUK4 368 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 FAM162AQ96A26 154 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 FSD1LQ9BXM9 530 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 MED28Q9H204 178 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 NECTIN3Q9NQS3 549 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TMEM131LA2VDJ0 1609 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 EEF2KO00418 725 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 POLBP06746 335 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 THRBP10828 461 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 EIF5AP63241 154 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 IL5RAQ01344 420 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 ORC1Q13415 861 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 E2F2Q14209 437 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 XKR3Q5GH77 459 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 CLVS2Q5SYC1 327 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SVOPLQ8N434 492 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 CDC26Q8NHZ8 85 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 KIF12Q96FN5 646 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 Q96MT0 163 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 SRPK1Q96SB4 655 aaKnown RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 RIT2Q99578 217 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 TMEM246Q9BRR3 403 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 OR51B5Q9H339 312 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 NUDT5Q9UKK9 219 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 MTF2Q9Y483 593 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-227ENST00000640648 NWD1Q149M9 1564 aa8.35□□□□□ -1.07
NECAP1-227ENST00000640648 NPR2P20594 1047 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 CD79BP40259 229 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 HSD17B4P51659 736 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 ZNF720Q7Z2F6 126 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 PSD2Q9BQI7 771 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 C8orf33Q9H7E9 229 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-227ENST00000640648 UBQLN2Q9UHD9 624 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 TBX20Q9UMR3 447 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 PAPSS1O43252 624 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-227ENST00000640648 DGKIO75912 1065 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 SOX11P35716 441 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 RHBDL3P58872 404 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 NFYCQ13952 458 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 SPCS2Q15005 226 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
NECAP1-227ENST00000640648 INO80DQ53TQ3 878 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-227ENST00000640648 HHIPL2Q6UWX4 724 aa8.34□□□□□ -1.07
NECAP1-227ENST00000640648 SLC25A41Q8N5S1 370 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms