RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 LIPMQ5VYY2 423 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 DNAJC14Q6Y2X3 702 aaPredicted RBP17.75■□□□□ 0.43
SCARB2-223ENST00000640640 OR52K2Q8NGK3 314 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 GDPD5Q8WTR4 605 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 PYDC1Q8WXC3 89 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 BTN2A3PQ96KV6 586 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TEPSINQ96N21 525 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 ACBD6Q9BR61 282 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TTPALQ9BTX7 342 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TNPO3Q9Y5L0 923 aaKnown RBP17.75■□□□□ 0.43
SCARB2-223ENST00000640640 CCDC154A6NI56 674 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 VPS4BO75351 444 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 FGF1P05230 155 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 GDF10P55107 478 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 BRI3BPQ8WY22 251 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 FAM126AQ9BYI3 521 aaPredicted RBP17.75■□□□□ 0.43
SCARB2-223ENST00000640640 LGALS13Q9UHV8 139 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 DOLKQ9UPQ8 538 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 hCG_2014768A0A024R1R8 64 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 ZNF682O95780 498 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 HLA-DPA1P20036 260 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TRMT11Q7Z4G4 463 aaKnown RBP17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TWNKQ96RR1 684 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 OSGEPL1Q9H4B0 414 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TEKT2Q9UIF3 430 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 SAC3D1A6NKF1 404 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 ZMPSTE24O75844 475 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 PCNAP12004 261 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 EPHA3P29320 983 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 CDC16Q13042 620 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 IL27RAQ6UWB1 636 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 OTOP3Q7RTS5 596 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 NIPA2Q8N8Q9 360 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 TRPC4APQ8TEL6 797 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 SPOCK2Q92563 424 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 CHRAC1Q9NRG0 131 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 ARL15Q9NXU5 204 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 IL1RAPL1Q9NZN1 696 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 VWA7Q9Y334 891 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 ARL5CA6NH57 179 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 XYLBO75191 536 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 CLPTM1O96005 669 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 SERPINA6P08185 405 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 L1CAMP32004 1257 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 GPC1P35052 558 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 DAOAP59103 153 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 NCALDP61601 193 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 MRPS22P82650 360 aaKnown RBP17.74■□□□□ 0.43
SCARB2-223ENST00000640640 ACBD5Q5T8D3 534 aaPredicted RBP17.74■□□□□ 0.43
SCARB2-223ENST00000640640 USP45Q70EL2 814 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 RDH11Q8TC12 318 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 C12orf65Q9H3J6 166 aaKnown RBP17.74■□□□□ 0.43
SCARB2-223ENST00000640640 GCATO75600 419 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 CREB1P16220 341 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 EPB42P16452 691 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 DGKAP23743 735 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 USP4Q13107 963 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 TARBP2Q15633 366 aaKnown RBP17.74■□□□□ 0.43
SCARB2-223ENST00000640640 SOWAHAQ2M3V2 549 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 SLC35B2Q8TB61 432 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 IRGQQ8WZA9 623 aa17.74■□□□□ 0.43
SCARB2-223ENST00000640640 ZCCHC2Q9C0B9 1178 aaKnown RBP17.74■□□□□ 0.43
SCARB2-223ENST00000640640 STN1Q9H668 368 aaKnown RBP17.74■□□□□ 0.43
SCARB2-223ENST00000640640 CARNS1A5YM72 827 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 H3BMM5 538 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 LPOP22079 712 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CRHR1P34998 444 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 MAPK8P45983 427 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ATXN1P54253 815 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 HPCAP84074 193 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CRY1Q16526 586 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 AFTPHQ6ULP2 937 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CRELD2Q6UXH1 353 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ZNF467Q7Z7K2 595 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ALYREFQ86V81 257 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 MED8Q96G25 268 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 MARK4Q96L34 752 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 BPIFA1Q9NP55 256 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 IMPAD1Q9NX62 359 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 TMEM59LQ9UK28 342 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 SEPT4O43236 478 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 TBL1XO60907 577 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 AP2A1O95782 977 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 COX4I1P13073 169 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 TSPAN8P19075 237 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 LRPAP1P30533 357 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 HSPA14Q0VDF9 509 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CCDC149Q6ZUS6 474 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 TDRPQ86YL5 185 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ZNF567Q8N184 647 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 AGO1Q9UL18 857 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 PCDHB9Q9Y5E1 797 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 YJEFN3A6XGL0 299 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 M0R3G1 203 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ZBTB14O43829 449 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 HNRNPLP14866 589 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 SNRPD1P62314 119 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 UBAP2LQ14157 1087 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 GALNT3Q14435 633 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 OASLQ15646 514 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms