RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 LRRC73Q5JTD7 316 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 BRMS1LQ5PSV4 323 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 SLC26A9Q7LBE3 791 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 VPS36Q86VN1 386 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 JAMLQ86YT9 394 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 GLMNQ92990 594 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 MED8Q96G25 268 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 TBCBQ99426 244 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 TRIM4Q9C037 500 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 SPASTQ9UBP0 616 aa15.29■□□□□ 0.04
SYNE2-228ENST00000639659 HEMK1Q9Y5R4 338 aaPredicted RBP15.29■□□□□ 0.04
SYNE2-228ENST00000639659 COL27A1Q8IZC6 1860 aaPredicted RBP15.29■□□□□ 0.04
SYNE2-228ENST00000639659 EME2A4GXA9 379 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 I6L893 689 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 K7ENP7 123 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 ANXA6P08133 673 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 PNMA6AP0CW24 399 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 ABL2P42684 1182 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 RPIAP49247 311 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 ADKP55263 362 aaKnown RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 PTK2Q05397 1052 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 NFATC3Q12968 1075 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 SPIDRQ14159 915 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 C5orf22Q49AR2 442 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 CARD16Q5EG05 197 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 C6orf132Q5T0Z8 1188 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 INO80CQ6PI98 192 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 SLC35F3Q8IY50 421 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 PHACTR4Q8IZ21 702 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 PCDH20Q8N6Y1 951 aaKnown RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 WDR36Q8NI36 951 aaKnown RBP15.28■□□□□ 0.04
SYNE2-228ENST00000639659 NPY6RQ99463 290 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 CCDC3Q9BQI4 270 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 EPB41L5Q9HCM4 733 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 GPR27Q9NS67 375 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 SIRPGQ9P1W8 387 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 GULP1Q9UBP9 304 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 APEX2Q9UBZ4 518 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 SALL4Q9UJQ4 1053 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 PCDHGC3Q9UN70 934 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 DOLKQ9UPQ8 538 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 CSNK1G3Q9Y6M4 447 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 RP1P56715 2156 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 MYO18BQ8IUG5 2567 aa15.28■□□□□ 0.04
SYNE2-228ENST00000639659 GOLGA8SH3BPF8 625 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 KRIT1O00522 736 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 ARHGAP6O43182 974 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 GCATO75600 419 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 BMP6P22004 513 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 CXCR3P49682 368 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 CLN3Q13286 438 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 FAXCQ5TGI0 409 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 GBP6Q6ZN66 633 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 ZNF683Q8IZ20 524 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 TPCN2Q8NHX9 752 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 BTN2A2Q8WVV5 523 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 TIGD1Q96MW7 591 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 SLC13A1Q9BZW2 595 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 FAM117AQ9C073 453 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 RRN3Q9NYV6 651 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.04
SYNE2-228ENST00000639659 PAXBP1Q9Y5B6 917 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 PCDHGA8Q9Y5G5 932 aa15.27■□□□□ 0.04
SYNE2-228ENST00000639659 PIEZO2Q9H5I5 2752 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 CCDC187A0A096LP49 1063 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 ILVBLA1L0T0 632 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 DRGXA6NNA5 263 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 C16orf96A6NNT2 1141 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 ZNF821O75541 412 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-228ENST00000639659 TCEA3O75764 348 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 FGFR1OPO95684 399 aaKnown RBP15.26■□□□□ 0.03
SYNE2-228ENST00000639659 UGT2B4P06133 528 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 MARSP56192 900 aaKnown RBP15.26■□□□□ 0.03
SYNE2-228ENST00000639659 ARF5P84085 180 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 GNA12Q03113 381 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 PTK2BQ14289 1009 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 EXOC3L4Q17RC7 722 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 ESRP1Q6NXG1 681 aaKnown RBP15.26■□□□□ 0.03
SYNE2-228ENST00000639659 SLC47A2Q86VL8 602 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 FAM131BQ86XD5 332 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 ZNF354CQ86Y25 554 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 SHC3Q92529 594 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 NAT6Q93015 286 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 GRAMD1AQ96CP6 724 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 PRR11Q96HE9 360 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-228ENST00000639659 FAM81BQ96LP2 452 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 KLF6Q99612 283 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-228ENST00000639659 ARHGAP9Q9BRR9 750 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 LRRC61Q9BV99 259 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 CEP44Q9C0F1 390 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 PADI4Q9UM07 663 aa15.26■□□□□ 0.03
SYNE2-228ENST00000639659 CDRT15L2A8MXV6 281 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 TSPAN6O43657 245 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 AP1G1O43747 822 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 WISP1O95388 367 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 F9P00740 461 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms