RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TRIM27P14373 513 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 IL1R1P14778 569 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 MAP2K2P36507 400 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 DPP6P42658 865 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 ADPRHP54922 357 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 OASLQ15646 514 aaKnown RBP0.72□□□□□ -2.29
LMBR1-222ENST00000638959 PTPN21Q16825 1174 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 FAM171A1Q5VUB5 890 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 FAM122CQ6P4D5 195 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 TRIM65Q6PJ69 517 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 ODF3L1Q8IXM7 274 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 PARP8Q8N3A8 854 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 PPHLN1Q8NEY8 458 aaKnown RBP0.72□□□□□ -2.29
LMBR1-222ENST00000638959 OR1N1Q8NGS0 311 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 SPATA22Q8NHS9 363 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 STAMBPL1Q96FJ0 436 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 REXO5Q96IC2 774 aaKnown RBP0.72□□□□□ -2.29
LMBR1-222ENST00000638959 LRRC1Q9BTT6 524 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 MMTAG2Q9BU76 263 aaKnown RBP0.72□□□□□ -2.29
LMBR1-222ENST00000638959 CHST8Q9H2A9 424 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 UPF2Q9HAU5 1272 aaKnown RBP0.72□□□□□ -2.29
LMBR1-222ENST00000638959 NOX4Q9NPH5 578 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 ARL15Q9NXU5 204 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 STK32BQ9NY57 414 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 SLCO3A1Q9UIG8 710 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 ZDHHC2Q9UIJ5 367 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 POMT2Q9UKY4 750 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 CNTN6Q9UQ52 1028 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 SLC6A5Q9Y345 797 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 LOXL2Q9Y4K0 774 aa0.72□□□□□ -2.29
LMBR1-222ENST00000638959 SRRM4A7MD48 611 aaKnown RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 J3KR12 359 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 CCNT2O60583 730 aaKnown RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ERVK-10P10266 1014 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ARP10275 920 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 HLA-DOBP13765 273 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ZKSCAN1P17029 563 aaPredicted RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 CCND1P24385 295 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 DCTP40126 519 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 HOXA1P49639 335 aaPredicted RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 CLCNKBP51801 687 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 MS4A2Q01362 244 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 RAPSNQ13702 412 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 TUBB2AQ13885 445 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 WDR38Q5JTN6 314 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 TLDC1Q6P9B6 456 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 PIK3AP1Q6ZUJ8 805 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 SERPINA11Q86U17 422 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 HERC6Q8IVU3 1022 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ZDHHC23Q8IYP9 409 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 GRAMD1CQ8IYS0 662 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 IPCEF1Q8WWN9 437 aaPredicted RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 TRIB2Q92519 343 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 SUCLG2Q96I99 432 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ST6GAL2Q96JF0 529 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 LRFN5Q96NI6 719 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ZIM3Q96PE6 472 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 MAP3K14Q99558 947 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 TUBB2BQ9BVA1 445 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 PLEKHA5Q9HAU0 1116 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 KLHL8Q9P2G9 620 aaPredicted RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 SLC9A2Q9UBY0 812 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 ASIC3Q9UHC3 531 aa0.71□□□□□ -2.3
LMBR1-222ENST00000638959 UBE2J1Q9Y385 318 aaPredicted RBP0.71□□□□□ -2.3
LMBR1-222ENST00000638959 CPED1A4D0V7 1026 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 CHL1O00533 1208 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 ZSCAN9O15535 394 aaPredicted RBP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 RASA4O43374 803 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 BCL2L11O43521 198 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 IL33O95760 270 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 DHRS4L1P0CG22 281 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 BRAFP15056 766 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 ZNF32P17041 273 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 AKAP5P24588 427 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 HOXC8P31273 242 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 CARSP49589 748 aaKnown RBP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 PGFP49763 221 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 SUMO3P55854 103 aaPredicted RBP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 RPS16P62249 146 aaKnown RBP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 GRAPQ13588 217 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 PLK5Q496M5 336 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 C5orf22Q49AR2 442 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 GLIPR1L2Q4G1C9 344 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 ATP13A5Q4VNC0 1218 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 SYTL3Q4VX76 610 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 C3orf38Q5JPI3 329 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 DCST1Q5T197 706 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 STXBP5Q5T5C0 1151 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 TMEM88Q6PEY1 159 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 CCNI2Q6ZMN8 369 aaPredicted RBP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 NECAB2Q7Z6G3 386 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 TRPT1Q86TN4 253 aaKnown RBP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.7□□□□□ -2.3
LMBR1-222ENST00000638959 RBFAQ8N0V3 343 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 Q8N377 158 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 ZNF614Q8N883 585 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 IL31RAQ8NI17 732 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 CREB3L4Q8TEY5 395 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 OMA1Q96E52 524 aa0.7□□□□□ -2.3
LMBR1-222ENST00000638959 FAR2Q96K12 515 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms