RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PANX3Q96QZ0 392 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 NFKBIL1Q9UBC1 381 aaPredicted RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 BNIP2Q12982 314 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 UCMAQ8WVF2 138 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 SHC3Q92529 594 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 VMP1Q96GC9 406 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 BBS4Q96RK4 519 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 SNX15Q9NRS6 342 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 RNF19AQ9NV58 838 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 C3orf18Q9UK00 162 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 GSTK1Q9Y2Q3 226 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 SMIM22K7EJ46 135 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 IFNGR2P38484 337 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 PTSQ03393 145 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 ATG14Q6ZNE5 492 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 OFCC1Q8IZS5 231 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 AMER2Q8N7J2 671 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 SELENOMQ8WWX9 145 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 MRPL57Q9BQC6 102 aaKnown RBP18.68■□□□□ 0.58
SCARB2-213ENST00000638680 IKZF3Q9UKT9 509 aa18.68■□□□□ 0.58
SCARB2-213ENST00000638680 DGKAP23743 735 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 GUCA1AP43080 201 aaPredicted RBP18.67■□□□□ 0.58
SCARB2-213ENST00000638680 STXBP5Q5T5C0 1151 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 C16orf59Q7L2K0 433 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 ELOVL4Q9GZR5 314 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 ZBTB14O43829 449 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 CST1P01037 141 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF549Q6P9A3 640 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 TMEM139Q8IV31 216 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 GIPC3Q8TF64 312 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 TMEM134Q9H6X4 195 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 AAASQ9NRG9 546 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 DIP2BQ9P265 1576 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 PXDNQ92626 1479 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 GSC2O15499 205 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 HNRNPLP14866 589 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCARB2-213ENST00000638680 CLCN5P51795 746 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 NOMO3P69849 1222 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 KLHL12Q53G59 568 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 BBS12Q6ZW61 710 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 EIF3MQ7L2H7 374 aaKnown RBP18.67■□□□□ 0.58
SCARB2-213ENST00000638680 SF3B1O75533 1304 aaKnown RBP eCLIP18.67■□□□□ 0.584e-6■■■■■ 139.6
SCARB2-213ENST00000638680 DHRS12A0PJE2 317 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 C2orf71A6NGG8 1288 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 HGFP14210 728 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF135P52742 658 aaPredicted RBP18.67■□□□□ 0.58
SCARB2-213ENST00000638680 CYP4F2P78329 520 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 CYP4F3Q08477 520 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 USP7Q93009 1102 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 ZHX1-C8orf76Q96EF9 292 aa18.67■□□□□ 0.58
SCARB2-213ENST00000638680 NARS2Q96I59 477 aaKnown RBP18.67■□□□□ 0.58
SCARB2-213ENST00000638680 PRPF19Q9UMS4 504 aaKnown RBP18.67■□□□□ 0.58
SCARB2-213ENST00000638680 EME2A4GXA9 379 aaPredicted RBP18.66■□□□□ 0.58
SCARB2-213ENST00000638680 DYRK3O43781 588 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 NTRK1P04629 796 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 URODP06132 367 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 HUNKP57058 714 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 XIAPP98170 497 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 USP4Q13107 963 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 MZT2AQ6P582 158 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 SCIMPQ6UWF3 145 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 MYDGFQ969H8 173 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 SMPD4Q9NXE4 827 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 TOR4AQ9NXH8 423 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 CCDC182A6NF36 153 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 CELF2O95319 508 aaKnown RBP18.66■□□□□ 0.58
SCARB2-213ENST00000638680 RASGEF1CQ8N431 466 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 AADATQ8N5Z0 425 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 RDH11Q8TC12 318 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 NPAS2Q99743 824 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 MAP2P11137 1827 aaKnown RBP18.66■□□□□ 0.58
SCARB2-213ENST00000638680 DDX3YO15523 660 aaKnown RBP18.66■□□□□ 0.58
SCARB2-213ENST00000638680 IDH3BO43837 385 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 CKBP12277 381 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 MAPKAPK3Q16644 382 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 SLC39A12Q504Y0 691 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 NKAPQ8N5F7 415 aaKnown RBP18.66■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF671Q8TAW3 534 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 SLITRK2Q9H156 845 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 ITGB1BP2Q9UKP3 347 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 KIF20BQ96Q89 1820 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 HOXA2O43364 376 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 FCGRTP55899 365 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 BCL2L1Q07817 233 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 MTX3Q5HYI7 312 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 RNF220Q5VTB9 566 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 PALB2Q86YC2 1186 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 STK40Q8N2I9 435 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 TMEM161BQ8NDZ6 487 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 RPS6KA6Q9UK32 745 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 PSMD11O00231 422 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 FFAR3O14843 346 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 GPR42O15529 346 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 RNASEH1O60930 286 aaKnown RBP18.66■□□□□ 0.58
SCARB2-213ENST00000638680 ALDH2P05091 517 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 RTKNQ9BST9 563 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 TRIM39Q9HCM9 518 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 S100A14Q9HCY8 104 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 XPR1Q9UBH6 696 aa18.66■□□□□ 0.58
SCARB2-213ENST00000638680 EGFL7Q9UHF1 273 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms