RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PRNPP04156 253 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 SLC1A1P43005 524 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 RHOAP61586 193 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 SNRPD1P62314 119 aaKnown RBP22.12■■□□□ 1.13
SCN1B-206ENST00000638536 C1orf216Q8TAB5 229 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 SNX19Q92543 992 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 NSMCE3Q96MG7 304 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 MIR1-1HGQ9H1L0 117 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 SP110Q9HB58 689 aa22.12■■□□□ 1.13
SCN1B-206ENST00000638536 LNP1A1A4G5 178 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 MUSKO15146 869 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 SPOPO43791 374 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 MARCKSL1P49006 195 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 VAV2P52735 878 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 PPP2CBP62714 309 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 PPP2CAP67775 309 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 IL10RBQ08334 325 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 SLC10A2Q12908 348 aaPredicted RBP22.11■■□□□ 1.13
SCN1B-206ENST00000638536 TRIM61Q5EBN2 209 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 GPR161Q8N6U8 529 aaKnown RBP22.11■■□□□ 1.13
SCN1B-206ENST00000638536 CASKIN2Q8WXE0 1202 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 RNF25Q96BH1 459 aaPredicted RBP22.11■■□□□ 1.13
SCN1B-206ENST00000638536 GRPEL1Q9HAV7 217 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 LUC7LQ9NQ29 371 aaKnown RBP22.11■■□□□ 1.13
SCN1B-206ENST00000638536 SPTBN2O15020 2390 aa22.11■■□□□ 1.13
SCN1B-206ENST00000638536 PJA2O43164 708 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 PLRG1O43660 514 aaKnown RBP22.1■■□□□ 1.13
SCN1B-206ENST00000638536 PALMO75781 387 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 GBE1Q04446 702 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 SLC10A7Q0GE19 358 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 PAFAH1B3Q15102 231 aaKnown RBP22.1■■□□□ 1.13
SCN1B-206ENST00000638536 WDR45BQ5MNZ6 344 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 SYCP2LQ5T4T6 812 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 LRRC38Q5VT99 294 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 KIAA0895LQ68EN5 471 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 MAP7D3Q8IWC1 876 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 RHOT1Q8IXI2 618 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 ZCCHC9Q8N567 271 aaKnown RBP22.1■■□□□ 1.13
SCN1B-206ENST00000638536 OR2T34Q8NGX1 318 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 RNF157Q96PX1 679 aa22.1■■□□□ 1.13
SCN1B-206ENST00000638536 TTC24A2A3L6 582 aaPredicted RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 IPO7O95373 1038 aaKnown RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 POP4O95707 220 aaKnown RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 KRT1P04264 644 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 UGT2B4P06133 528 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 LLGL1Q15334 1064 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 FAM182AQ5T1J6 154 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 PARS2Q7L3T8 475 aaKnown RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 GDAP1L1Q96MZ0 367 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 PCED1AQ9H1Q7 454 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TP53BP1Q12888 1972 aaPredicted RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TMEM131Q92545 1883 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3DA0A087WVF3 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3IA0A087WXS9 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3EA0A087X179 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3KA0A087X1G2 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3FA6NER0 549 aaPredicted RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3LB9A6J9 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 KHNYNO15037 678 aaKnown RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 PIGNO95427 931 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 CFIP05156 583 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3HP0C7X1 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 SERPINB6P35237 376 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 SFSWAPQ12872 951 aaKnown RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3GQ6DHY5 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3CQ6IPX1 549 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 SLC23A3Q6PIS1 610 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 MFSD7Q6UXD7 560 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 ERN2Q76MJ5 926 aaKnown RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 DAAM2Q86T65 1068 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 TBC1D3Q8IZP1 549 aaPredicted RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 PLD5Q8N7P1 536 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 C12orf50Q8NA57 414 aaPredicted RBP22.09■■□□□ 1.13
SCN1B-206ENST00000638536 KRT35Q92764 455 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 KLHL32Q96NJ5 620 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 CAPN10Q9HC96 672 aa22.09■■□□□ 1.13
SCN1B-206ENST00000638536 LRRC72A6NJI9 287 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 BTNL10A8MVZ5 291 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 WNT9AO14904 365 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 IGSF6O95976 241 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 ITGB7P26010 798 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 GSDMDP57764 484 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 LBRQ14739 615 aaKnown RBP22.08■■□□□ 1.13
SCN1B-206ENST00000638536 DUOXA1Q1HG43 343 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 AASDHQ4L235 1098 aaPredicted RBP22.08■■□□□ 1.13
SCN1B-206ENST00000638536 C11orf63Q6NUN7 778 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 KIAA1328Q86T90 577 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 PGBD5Q8N414 524 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 ATPAF2Q8N5M1 289 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 HDAC8Q9BY41 377 aa22.08■■□□□ 1.13
SCN1B-206ENST00000638536 LRRK1Q38SD2 2015 aa22.08■■□□□ 1.12
SCN1B-206ENST00000638536 SPEGQ15772 3267 aa22.08■■□□□ 1.12
SCN1B-206ENST00000638536 C16orf96A6NNT2 1141 aa22.07■■□□□ 1.12
SCN1B-206ENST00000638536 SLC7A4O43246 635 aa22.07■■□□□ 1.12
SCN1B-206ENST00000638536 MAT2AP31153 395 aaKnown RBP22.07■■□□□ 1.12
SCN1B-206ENST00000638536 GALNT2Q10471 571 aa22.07■■□□□ 1.12
SCN1B-206ENST00000638536 LRRC73Q5JTD7 316 aa22.07■■□□□ 1.12
SCN1B-206ENST00000638536 LAYNQ6UX15 382 aa22.07■■□□□ 1.12
SCN1B-206ENST00000638536 NPNTQ6UXI9 565 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms