RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 GANCQ8TET4 914 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SETD7Q8WTS6 366 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 FAM172AQ8WUF8 416 aa8□□□□□ -1.13
PNKP-229ENST00000637897 OR8D1Q8WZ84 308 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TSC1Q92574 1164 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ARHGEF2Q92974 986 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 SERAC1Q96JX3 654 aa8□□□□□ -1.13
PNKP-229ENST00000637897 BMFQ96LC9 184 aa8□□□□□ -1.13
PNKP-229ENST00000637897 PEBP4Q96S96 227 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ELF4Q99607 663 aaPredicted RBP8□□□□□ -1.13
PNKP-229ENST00000637897 EIF3CQ99613 913 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 CHP1Q99653 195 aa8□□□□□ -1.13
PNKP-229ENST00000637897 AGPAT1Q99943 283 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TUBB2BQ9BVA1 445 aa8□□□□□ -1.13
PNKP-229ENST00000637897 MUC3BQ9H195 1237 aa8□□□□□ -1.13
PNKP-229ENST00000637897 OSBPL2Q9H1P3 480 aa8□□□□□ -1.13
PNKP-229ENST00000637897 HAUS4Q9H6D7 363 aa8□□□□□ -1.13
PNKP-229ENST00000637897 L2HGDHQ9H9P8 463 aa8□□□□□ -1.13
PNKP-229ENST00000637897 FZD3Q9NPG1 666 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TMEM248Q9NWD8 314 aa8□□□□□ -1.13
PNKP-229ENST00000637897 OR12D3Q9UGF7 316 aa8□□□□□ -1.13
PNKP-229ENST00000637897 MYO6Q9UM54 1294 aa8□□□□□ -1.13
PNKP-229ENST00000637897 NCKAP1Q9Y2A7 1128 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CEP83Q9Y592 693 aa8□□□□□ -1.13
PNKP-229ENST00000637897 LOC400499M0QZD8 3231 aa8□□□□□ -1.13
PNKP-229ENST00000637897 URB1O60287 2271 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 FAM208BQ5VWN6 2430 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3DA0A087WVF3 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3IA0A087WXS9 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3EA0A087X179 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3KA0A087X1G2 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 LY6G6EA0A0G2JKS1 128 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 A0A1W2PQU0 124 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 SSU72P8A0A1W2PR75 194 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 FAM149AA5PLN7 773 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3FA6NER0 549 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 LRRC72A6NJI9 287 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3LB9A6J9 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TLR4O00206 839 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 CASC3O15234 703 aaKnown RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 FLRT2O43155 660 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 SLC7A4O43246 635 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 ATMINO43313 823 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 RNASEH1O60930 286 aaKnown RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 RNGTTO60942 597 aaKnown RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 PLEKP08567 350 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3HP0C7X1 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 HOXB3P14651 431 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 EPHA8P29322 1005 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 RXRGP48443 463 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 CCT8P50990 548 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 OXCT1P55809 520 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 CLDN2P57739 230 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 SPA17Q15506 151 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 LRRK1Q38SD2 2015 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3GQ6DHY5 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3CQ6IPX1 549 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 NAPEPLDQ6IQ20 393 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 PARS2Q7L3T8 475 aaKnown RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 STRADAQ7RTN6 431 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TMPRSS7Q7RTY8 843 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 ZNF571Q7Z3V5 609 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 MCOLN2Q8IZK6 566 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TBC1D3Q8IZP1 549 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 SLC25A45Q8N413 288 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 MFSD2AQ8NA29 543 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 C3orf20Q8ND61 904 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 OR6K2Q8NGY2 324 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 NTAN1Q96AB6 310 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 CCDC42Q96M95 316 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 KLF6Q99612 283 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 MYOCQ99972 504 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 SPON2Q9BUD6 331 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 TSGA10Q9BZW7 698 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 ZYG11BQ9C0D3 744 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 PDCL3Q9H2J4 239 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 NHEJ1Q9H9Q4 299 aaPredicted RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 LUC7LQ9NQ29 371 aaKnown RBP7.99□□□□□ -1.13
PNKP-229ENST00000637897 LZTFL1Q9NQ48 299 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 UCKL1Q9NWZ5 548 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 ADAM22Q9P0K1 906 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 KLF15Q9UIH9 416 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 SLC25A13Q9UJS0 675 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 FZD10Q9ULW2 581 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 ITM2BQ9Y287 266 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 FADS3Q9Y5Q0 445 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 U3KQA8 63 aa7.99□□□□□ -1.13
PNKP-229ENST00000637897 MYLKQ15746 1914 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 POM121BA6NF01 834 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 LRRC53A6NM62 1247 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 DDX3XO00571 662 aaKnown RBP eCLIP7.98□□□□□ -1.13
PNKP-229ENST00000637897 TRIM38O00635 465 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 SLC31A1O15431 190 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 INSIG1O15503 277 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 KRT86O43790 486 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 TRIM16O95361 564 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 SLU7O95391 586 aaKnown RBP7.98□□□□□ -1.13
PNKP-229ENST00000637897 LCA5LO95447 670 aa7.98□□□□□ -1.13
PNKP-229ENST00000637897 SERPING1P05155 500 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms