RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MAGEC1O60732 1142 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 LRCH4O75427 683 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 TMCC1O94876 653 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 IGSF6O95976 241 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 GYPCP04921 128 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 TPM1P09493 284 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 ADRB3P13945 408 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 NDST2P52849 883 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 RHOAP61586 193 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 SHC2P98077 582 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 IL9RQ01113 521 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 SERINC3Q13530 473 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 ACAP1Q15027 740 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 CA9Q16790 459 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 MYLK3Q32MK0 819 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 INO80DQ53TQ3 878 aaPredicted RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 PRAMEF14Q5SWL7 426 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 CCDC122Q5T0U0 273 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 ATXN7L2Q5T6C5 722 aaPredicted RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 PSTKQ8IV42 348 aaKnown RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 ARFGAP1Q8N6T3 406 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 LRIG1Q96JA1 1093 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 FEM1CQ96JP0 617 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 GDAP1L1Q96MZ0 367 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 ELF4Q99607 663 aaPredicted RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 OSBPL1AQ9BXW6 950 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 CNTNAP3Q9BZ76 1288 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 KLC2Q9H0B6 622 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 THAP2Q9H0W7 228 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 UBA2Q9UBT2 640 aaPredicted RBP14.03□□□□□ -0.16
PNKP-228ENST00000637325 PCOLCE2Q9UKZ9 415 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 PTPRBP23467 1997 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 A0A087X0T9 212 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 A0A1B0GTQ1 180 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 NEMP1O14524 444 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 TRIM16O95361 564 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 UGT2B4P06133 528 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 FAM228BP0C875 321 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 PRLRP16471 622 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 AKT2P31751 481 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 GKP32189 559 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 PCK1P35558 622 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 ZNF135P52742 658 aaPredicted RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 RPS21P63220 83 aaKnown RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 TRIM14Q14142 442 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 PIGHQ14442 188 aaPredicted RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 BOLA3Q53S33 107 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 ZNF805Q5CZA5 627 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 ALKBH5Q6P6C2 394 aaKnown RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 RFX8Q6ZV50 586 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 PARS2Q7L3T8 475 aaKnown RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 OXR1Q8N573 874 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 NETO2Q8NC67 525 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 RNF214Q8ND24 703 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 KLHDC7BQ96G42 594 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 CELF6Q96J87 481 aaKnown RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 CDC6Q99741 560 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 MYOCQ99972 504 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 NUP85Q9BW27 656 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 ZWILCHQ9H900 591 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 ZNHIT6Q9NWK9 470 aaKnown RBP14.02□□□□□ -0.17
PNKP-228ENST00000637325 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 ANAPC7Q9UJX3 599 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 CACNA1BQ00975 2339 aa14.02□□□□□ -0.17
PNKP-228ENST00000637325 C16orf96A6NNT2 1141 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 H3BRJ5 948 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 DFFAO00273 331 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 YKT6O15498 198 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 PCDHGA12O60330 932 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 ITGAVP06756 1048 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 ERCC2P18074 760 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 HNRNPA2B1P22626 353 aaKnown RBP14.01□□□□□ -0.17
PNKP-228ENST00000637325 EIF4A3P38919 411 aaKnown RBP14.01□□□□□ -0.17
PNKP-228ENST00000637325 ARL4AP40617 200 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 GRK6P43250 576 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 SSR1P43307 286 aaKnown RBP14.01□□□□□ -0.17
PNKP-228ENST00000637325 ARRB1P49407 418 aaPredicted RBP14.01□□□□□ -0.17
PNKP-228ENST00000637325 PAPOLAP51003 745 aaKnown RBP14.01□□□□□ -0.17
PNKP-228ENST00000637325 NXPH1P58417 271 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 OVGP1Q12889 678 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 SMTNL2Q2TAL5 461 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 ZNF284Q2VY69 593 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 SEL1L3Q68CR1 1132 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 KIAA1161Q6NSJ0 714 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 GDPD4Q6W3E5 623 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 DBX2Q6ZNG2 339 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 IQCHQ86VS3 1027 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 HSPH1Q92598 858 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 RAB7BQ96AH8 199 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 BTBD6Q96KE9 485 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 KLHL32Q96NJ5 620 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 SLC39A8Q9C0K1 460 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 DEF6Q9H4E7 631 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 LRRC19Q9H756 370 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms