RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CASKIN2Q8WXE0 1202 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 RAB7BQ96AH8 199 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 GDAP1L1Q96MZ0 367 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 OSBPL1AQ9BXW6 950 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 ACTL7AQ9Y615 435 aa18.23■□□□□ 0.51
PNKP-225ENST00000636214 TMCO5BA8MYB1 307 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 FGF10O15520 208 aaPredicted RBP18.22■□□□□ 0.51
PNKP-225ENST00000636214 KDELR3O43731 214 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 POP4O95707 220 aaKnown RBP18.22■□□□□ 0.51
PNKP-225ENST00000636214 IGSF6O95976 241 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 DNAJC3Q13217 504 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 SMAD1Q15797 465 aaKnown RBP18.22■□□□□ 0.51
PNKP-225ENST00000636214 ASIC2Q16515 512 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 ZNF805Q5CZA5 627 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 DCP2Q8IU60 420 aaKnown RBP18.22■□□□□ 0.51
PNKP-225ENST00000636214 PYROXD2Q8N2H3 581 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 BPIFA3Q9BQP9 254 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 SLC17A9Q9BYT1 436 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 KLHL11Q9NVR0 708 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 TMEM63CQ9P1W3 806 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 ZFR2Q9UPR6 939 aaKnown RBP18.22■□□□□ 0.51
PNKP-225ENST00000636214 FREM2Q5SZK8 3169 aa18.22■□□□□ 0.51
PNKP-225ENST00000636214 FAM149AA5PLN7 773 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 C16orf96A6NNT2 1141 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 TSPAN6O43657 245 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 AP1G1O43747 822 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 UGT2B4P06133 528 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 ALPPL2P10696 532 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 JUPP14923 745 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 XPAP23025 273 aaPredicted RBP18.21■□□□□ 0.51
PNKP-225ENST00000636214 PSMA2P25787 234 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 YBEYP58557 167 aaPredicted RBP18.21■□□□□ 0.51
PNKP-225ENST00000636214 TPI1P60174 286 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 RHOAP61586 193 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 RPL7AP62424 266 aaKnown RBP18.21■□□□□ 0.51
PNKP-225ENST00000636214 TPM4P67936 248 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 DAB2P98082 770 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 ARTNQ5T4W7 220 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 SFMBT2Q5VUG0 894 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 LEKR1Q6ZMV7 388 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 APTXQ7Z2E3 356 aaKnown RBP18.21■□□□□ 0.51
PNKP-225ENST00000636214 TMC6Q7Z403 805 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 PDCD7Q8N8D1 485 aaKnown RBP18.21■□□□□ 0.51
PNKP-225ENST00000636214 MDM1Q8TC05 714 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 VCPIP1Q96JH7 1222 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 NCAPGQ9BPX3 1015 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 HSD3B7Q9H2F3 369 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 PARVAQ9NVD7 372 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 EVA1BQ9NVM1 165 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 IPO11Q9UI26 975 aaKnown RBP18.21■□□□□ 0.51
PNKP-225ENST00000636214 FZD10Q9ULW2 581 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 FADS3Q9Y5Q0 445 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 HS3ST3A1Q9Y663 406 aa18.21■□□□□ 0.51
PNKP-225ENST00000636214 ZFYVE26Q68DK2 2539 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 URB1O60287 2271 aaKnown RBP18.2■□□□□ 0.5
PNKP-225ENST00000636214 DSPP15924 2871 aaKnown RBP18.2■□□□□ 0.5
PNKP-225ENST00000636214 LRRC53A6NM62 1247 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 RASA4BC9J798 803 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 FPGTO14772 594 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 TEX33O43247 280 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 RASA4O43374 803 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 TMCC1O94876 653 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 CD160O95971 181 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 CKMT2P17540 419 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 HTR7P34969 479 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 ACADVLP49748 655 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 CLDN2P57739 230 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 ILKQ13418 452 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 MYLK3Q32MK0 819 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 PARP15Q460N3 678 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 CAVIN1Q6NZI2 390 aaKnown RBP18.2■□□□□ 0.5
PNKP-225ENST00000636214 KYAT3Q6YP21 454 aaKnown RBP18.2■□□□□ 0.5
PNKP-225ENST00000636214 GCNT7Q6ZNI0 430 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 Q6ZSR6 202 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 OR13H1Q8NG92 308 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 KLHL32Q96NJ5 620 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 MAGEB5Q9BZ81 275 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
PNKP-225ENST00000636214 DNAJC28Q9NX36 388 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 NEU3Q9UQ49 428 aa18.2■□□□□ 0.5
PNKP-225ENST00000636214 TCRBV5S1A1TA0A578 114 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 NEMP2A6NFY4 417 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 H3BM21 787 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 RNF103O00237 685 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 DAPK3O43293 454 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 RNF8O76064 485 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 PAK4O96013 591 aaPredicted RBP18.19■□□□□ 0.5
PNKP-225ENST00000636214 SERPINC1P01008 464 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 GKP32189 559 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 ZNF165P49910 485 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 INO80DQ53TQ3 878 aaPredicted RBP18.19■□□□□ 0.5
PNKP-225ENST00000636214 ATXN7L2Q5T6C5 722 aaPredicted RBP18.19■□□□□ 0.5
PNKP-225ENST00000636214 GDPD4Q6W3E5 623 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 ABI3BPQ7Z7G0 1075 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 CXorf40AQ8TE69 158 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 IFT43Q96FT9 208 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 HMCESQ96FZ2 354 aa18.19■□□□□ 0.5
PNKP-225ENST00000636214 C1QTNF7Q9BXJ2 289 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms