RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DHFR2Q86XF0 187 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 ACVR1CQ8NER5 493 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 GRIN3AQ8TCU5 1115 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 COX4I2Q96KJ9 171 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 TRPC7Q9HCX4 862 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 C8orf4Q9NR00 106 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 ARHGEF38Q9NXL2 777 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 XPR1Q9UBH6 696 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 TRHDEQ9UKU6 1024 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 DOCK1Q14185 1865 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 KANSL1LA0AUZ9 987 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PRORSD1PA6NEY8 169 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 KCNK1O00180 336 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PSMD12O00232 456 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PHGDHO43175 533 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 SNRPB2P08579 225 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 NELFEP18615 380 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 MYF6P23409 242 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 DNAJB13P59910 316 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 LY6KQ17RY6 165 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 MAP7D1Q3KQU3 841 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 HMBOX1Q6NT76 420 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 ERMP1Q7Z2K6 904 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 THAP11Q96EK4 314 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 SGF29Q96ES7 293 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 KIF12Q96FN5 646 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 GBA3Q9H227 469 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 MRPL46Q9H2W6 279 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 ACSS2Q9NR19 701 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 TMEM181Q9P2C4 612 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF112Q9UJU3 913 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 CROTQ9UKG9 612 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF711Q9Y462 761 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 HEMK1Q9Y5R4 338 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 TMEM221A6NGB7 291 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 TRIM64A6NGJ6 449 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 EEF2KO00418 725 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 UBDO15205 165 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 SRP72O76094 671 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 SAT1P21673 171 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 CDH15P55291 814 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PRKCQQ04759 706 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 CXCL9Q07325 125 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 OLIG2Q13516 323 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 AMHR2Q16671 573 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PDCD4Q53EL6 469 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 TREML2Q5T2D2 321 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 CERCAMQ5T4B2 595 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PTAR1Q7Z6K3 402 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 COLGALT2Q8IYK4 626 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 CENPLQ8N0S6 344 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 C7orf31Q8N865 590 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 OR2T34Q8NGX1 318 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 OR2T3Q8NH03 318 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 TRAPPC12Q8WVT3 735 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 PGLYRP2Q96PD5 576 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 TRIM15Q9C019 465 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 SMARCAD1Q9H4L7 1026 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 EML4Q9HC35 981 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 CHRAC1Q9NRG0 131 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 EBF1Q9UH73 591 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 WDR37Q9Y2I8 494 aa14.98□□□□□ -0.01
CACNA1A-220ENST00000635988 COL4A5P29400 1685 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 LOC285556D6RIA3 1793 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 DYTNA2CJ06 578 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 MRASO14807 208 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 AKAP10O43572 662 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 C7P10643 843 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 RAB10P61026 200 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 PLOD1Q02809 727 aaPredicted RBP14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 MTA1Q13330 715 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 AGKQ53H12 422 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 ELMSAN1Q6PJG2 1045 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF786Q8N393 782 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 OR6B3Q8NGW1 331 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 SPPL2BQ8TCT7 592 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 ZUFSPQ96AP4 578 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 VAT1Q99536 393 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 APBA2Q99767 749 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 MRPL57Q9BQC6 102 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 GTSE1Q9NYZ3 720 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 TDRKHQ9Y2W6 561 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 DCLK1O15075 740 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 SUPT3HO75486 399 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 GPC4O75487 556 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 ATP5F1P24539 256 aaPredicted RBP14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 PRAMEP78395 509 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 PHEXP78562 749 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 CDH17Q12864 832 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 CELF3Q5SZQ8 465 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 DEFB106AQ8N104 65 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 GOLM1Q8NBJ4 401 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 CCDC126Q96EE4 140 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 MPHOSPH6Q99547 160 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 DOK1Q99704 481 aa14.97□□□□□ -0.01
CACNA1A-220ENST00000635988 MEAF6Q9HAF1 191 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms