RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZCCHC9Q8N567 271 aaKnown RBP17.01■□□□□ 0.31
UBE3D-208ENST00000626828 GRIN3AQ8TCU5 1115 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 GDAP1L1Q96MZ0 367 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 ZDHHC5Q9C0B5 715 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 ZDHHC6Q9H6R6 413 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 IMPACTQ9P2X3 320 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 IPO11Q9UI26 975 aaKnown RBP17.01■□□□□ 0.31
UBE3D-208ENST00000626828 MFHAS1Q9Y4C4 1052 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 PCDHA13Q9Y5I0 950 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 ADAMTS9Q9P2N4 1935 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 TRPM6Q9BX84 2022 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 KRIT1O00522 736 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 PALMO75781 387 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 IGSF6O95976 241 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 FECHP22830 423 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 ITGB7P26010 798 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 CDC25BP30305 580 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 SERPINB6P35237 376 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 NUDT1P36639 197 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 NOP2P46087 812 aaKnown RBP17■□□□□ 0.31
UBE3D-208ENST00000626828 AFF3P51826 1226 aaKnown RBP17■□□□□ 0.31
UBE3D-208ENST00000626828 TAS2R40P59535 323 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 RFTN1Q14699 578 aaPredicted RBP17■□□□□ 0.31
UBE3D-208ENST00000626828 TEAD4Q15561 434 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 ZNF805Q5CZA5 627 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 ZFYVE27Q5T4F4 411 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 PIP5KL1Q5T9C9 394 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 FBXL19Q6PCT2 694 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 CPNE8Q86YQ8 564 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 LRRC49Q8IUZ0 686 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 OSBPL1AQ9BXW6 950 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 CPEB1Q9BZB8 566 aaKnown RBP17■□□□□ 0.31
UBE3D-208ENST00000626828 SP110Q9HB58 689 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 PDFQ9HBH1 243 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 PREBQ9HCU5 417 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 ETNK2Q9NVF9 386 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 SPTBN2O15020 2390 aa17■□□□□ 0.31
UBE3D-208ENST00000626828 TM4SF5O14894 197 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 KDELR1P24390 212 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 GJC1P36383 396 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 CSNK1DP48730 415 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 CSNK1EP49674 416 aaKnown RBP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 NEK3P51956 506 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 HADHBP55084 474 aaKnown RBP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 TAS2R38P59533 333 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 RACK1P63244 317 aaKnown RBP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 NSUN2Q08J23 767 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 DPYSL3Q14195 570 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 GRM3Q14832 879 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 ATXN7L2Q5T6C5 722 aaPredicted RBP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 TMCO4Q5TGY1 634 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 LRRC38Q5VT99 294 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 GDPD4Q6W3E5 623 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 NPWQ8N729 165 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 SKA1Q96BD8 255 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 ZNF599Q96NL3 588 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 ORAI3Q9BRQ5 295 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 GTPBP2Q9BX10 602 aaKnown RBP16.99■□□□□ 0.31
UBE3D-208ENST00000626828 CALN1Q9BXU9 219 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 TM9SF3Q9HD45 589 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 DMXL1Q9Y485 3027 aa16.99■□□□□ 0.31
UBE3D-208ENST00000626828 C16orf96A6NNT2 1141 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 RNF103O00237 685 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 LATO43561 262 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 NDUFA10O95299 355 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 CD48P09326 243 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 GKP32189 559 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 MAPK8P45983 427 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 RENBPP51606 427 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 MMRN1Q13201 1228 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 ANKRD20A8PQ5CZ79 823 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 IL27RAQ6UWB1 636 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 DGLUCYQ7Z3D6 616 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 NETO2Q8NC67 525 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 OR6K2Q8NGY2 324 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 HCAR2Q8TDS4 363 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 RAB7BQ96AH8 199 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 FEM1CQ96JP0 617 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 KLHL32Q96NJ5 620 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 ZNF670Q9BS34 389 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 EBF2Q9HAK2 575 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 LHX3Q9UBR4 397 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 DMTF1Q9Y222 760 aa16.98■□□□□ 0.31
UBE3D-208ENST00000626828 A0A0A6YYK5 440 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-208ENST00000626828 DCDC2BA2VCK2 349 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 RNGTTO60942 597 aaKnown RBP16.97■□□□□ 0.31
UBE3D-208ENST00000626828 PCDH8O95206 1070 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 UGT2B4P06133 528 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 ADRB3P13945 408 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 GRIA4P48058 902 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 PAFAH1B3Q15102 231 aaKnown RBP16.97■□□□□ 0.31
UBE3D-208ENST00000626828 UAP1L1Q3KQV9 507 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 SRLQ86TD4 932 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 TTC7BQ86TV6 843 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 TP53INP2Q8IXH6 220 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 RHOT1Q8IXI2 618 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 PCDH19Q8TAB3 1148 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms