RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 SEC14L2O76054 403 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 GFPT2O94808 682 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 HEXAP06865 529 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 ACADMP11310 421 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 UNGP13051 313 aaPredicted RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 YWHAQP27348 245 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 CPOXP36551 454 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 CTCFP49711 727 aaPredicted RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 DRG2P55039 364 aaKnown RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 RPL7AP62424 266 aaKnown RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 ZNF91Q05481 1191 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 TMEM115Q12893 351 aaPredicted RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 EIF4A2Q14240 407 aaKnown RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 TAF11Q15544 211 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 MEA1Q16626 185 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 SMTNL2Q2TAL5 461 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 PIK3CD-AS1Q5SR53 167 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 SPATA1Q5VX52 437 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 TXNDC8Q6A555 127 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 SLC18B1Q6NT16 456 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 ZNF793Q6ZN11 406 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 SLC46A3Q7Z3Q1 461 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 YTHDF3Q7Z739 585 aaKnown RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 GPAT4Q86UL3 456 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 DNAJC10Q8IXB1 793 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 CADM3Q8N126 398 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 SLC25A41Q8N5S1 370 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 ATOH1Q92858 354 aaPredicted RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 MSI2Q96DH6 328 aaKnown RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 CRAMP1Q96RY5 1269 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 TUBB6Q9BUF5 446 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 MUC13Q9H3R2 512 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 SCPEP1Q9HB40 452 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 WDR6Q9NNW5 1121 aaKnown RBP4.35□□□□□ -1.71
CDR1-202ENST00000625883 CTNNAL1Q9UBT7 734 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 CAPN7Q9Y6W3 813 aa4.35□□□□□ -1.71
CDR1-202ENST00000625883 TTBK1Q5TCY1 1321 aaPredicted RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 A6NNC1 897 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 TAF4O00268 1085 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 RNMTO43148 476 aaKnown RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 PRPF4O43172 522 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDR1-202ENST00000625883 TLX3O43711 291 aaPredicted RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 SLC25A17O43808 307 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 TLR2O60603 784 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 CNOT3O75175 753 aaKnown RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 SEC31AO94979 1220 aaKnown RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 SPARCP09486 303 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 SLC2A4P14672 509 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 CTPS1P17812 591 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 POU1F1P28069 291 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 RYKP34925 604 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 PBX3P40426 434 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 MLH1P40692 756 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 CENPAP49450 140 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 CLDN2P57739 230 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 YWHAZP63104 245 aaKnown RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 ID2Q02363 134 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 PRKG2Q13237 762 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 CDC73Q6P1J9 531 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 CNGA4Q8IV77 575 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 NME8Q8N427 588 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 DPP10Q8N608 796 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 LRRC57Q8N9N7 239 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 KDM1BQ8NB78 822 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 WDR83Q9BRX9 315 aaKnown RBP4.34□□□□□ -1.71
CDR1-202ENST00000625883 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 RNF146Q9NTX7 359 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 MSRB1Q9NZV6 116 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 MKLN1Q9UL63 735 aa4.34□□□□□ -1.71
CDR1-202ENST00000625883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDR1-202ENST00000625883 A0A1W2PPC1 479 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 SNAP23O00161 211 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 EBAG9O00559 213 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 TOP3BO95985 862 aaKnown RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 TM4SF1P30408 202 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 TNFSF8P32971 234 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 TTKP33981 857 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 ARF3P61204 181 aaPredicted RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 ARF1P84077 181 aaKnown RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 RNPS1Q15287 305 aaKnown RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 SERPINA11Q86U17 422 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 GPSM1Q86YR5 675 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 USP6NLQ92738 828 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 INTS12Q96CB8 462 aaKnown RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 GHITMQ9H3K2 345 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 SLCO3A1Q9UIG8 710 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 INTS6Q9UL03 887 aaKnown RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 A4GNTQ9UNA3 340 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 SLC45A1Q9Y2W3 748 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 RAP2CQ9Y3L5 183 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 LAS1LQ9Y4W2 734 aaKnown RBP4.33□□□□□ -1.72
CDR1-202ENST00000625883 KCNE2Q9Y6J6 123 aa4.33□□□□□ -1.72
CDR1-202ENST00000625883 A0A1W2PQF6 199 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 DYTNA2CJ06 578 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 KCNU1A8MYU2 1149 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms