RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 HNRNPLP14866 589 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCNA1-203ENST00000625767 GEMIN4P57678 1058 aaKnown RBP16.84■□□□□ 0.29
CCNA1-203ENST00000625767 PTK6Q13882 451 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 GAS6Q14393 721 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 DPY19L3Q6ZPD9 716 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 ARHGEF18Q6ZSZ5 1173 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 PRPF39Q86UA1 669 aaKnown RBP16.84■□□□□ 0.29
CCNA1-203ENST00000625767 OR2A12Q8NGT7 310 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 GBA3Q9H227 469 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 NOD2Q9HC29 1040 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 RSPH14Q9UHP6 348 aa16.84■□□□□ 0.29
CCNA1-203ENST00000625767 MYLKQ15746 1914 aa16.83■□□□□ 0.29
CCNA1-203ENST00000625767 TCRBV7S3A2A0A539 114 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 ESYT3A0FGR9 886 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 FAM170BA6NMN3 283 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 OPHN1O60890 802 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 SIN3BO75182 1162 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 KLF8O95600 359 aaPredicted RBP16.83■□□□□ 0.28
CCNA1-203ENST00000625767 GAS8O95995 478 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 RHOXF2BP0C7M4 288 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 COL9A1P20849 921 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 IVDP26440 423 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 NNMTP40261 264 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 CD86P42081 329 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 LMNB2Q03252 620 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 ENPP2Q13822 863 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 KIAA1211LQ6NV74 962 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 NUDT18Q6ZVK8 323 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 TXNDC5Q8NBS9 432 aaKnown RBP16.83■□□□□ 0.28
CCNA1-203ENST00000625767 OR2AP1Q8NGE2 309 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 CCDC26Q8TAB7 109 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 CASKIN2Q8WXE0 1202 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 VAT1Q99536 393 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 FERMT1Q9BQL6 677 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 RHOXF2Q9BQY4 288 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 MLPHQ9BV36 600 aaPredicted RBP16.83■□□□□ 0.28
CCNA1-203ENST00000625767 POLR1EQ9GZS1 481 aaKnown RBP16.83■□□□□ 0.28
CCNA1-203ENST00000625767 DPH5Q9H2P9 285 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 LMAN1LQ9HAT1 526 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 ETNK1Q9HBU6 452 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 RAB6BQ9NRW1 208 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 ASIC3Q9UHC3 531 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 TRHDEQ9UKU6 1024 aa16.83■□□□□ 0.28
CCNA1-203ENST00000625767 STK10O94804 968 aaKnown RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 PIGNO95427 931 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 EPHX1P07099 455 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 CTSLP07711 333 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 CCNHP51946 323 aaPredicted RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 NAA30Q147X3 362 aaPredicted RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 HNRNPA1L2Q32P51 320 aaKnown RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 C9orf64Q5T6V5 341 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 ALG1LQ6GMV1 187 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 KDELC2Q7Z4H8 507 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 STK40Q8N2I9 435 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 RYBPQ8N488 228 aaPredicted RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 PCDH20Q8N6Y1 951 aaKnown RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 ISG20Q96AZ6 181 aaKnown RBP16.82■□□□□ 0.28
CCNA1-203ENST00000625767 RUNDC3BQ96NL0 473 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 CEP44Q9C0F1 390 aa16.82■□□□□ 0.28
CCNA1-203ENST00000625767 CXorf51AA0A1B0GTR3 108 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 STK25O00506 426 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 HEXIM1O94992 359 aaKnown RBP16.81■□□□□ 0.28
CCNA1-203ENST00000625767 RPL21P46778 160 aaKnown RBP16.81■□□□□ 0.28
CCNA1-203ENST00000625767 METAP1P53582 386 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 BASP1P80723 227 aaKnown RBP16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SKOR1P84550 965 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SPARCL1Q14515 664 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 CARD16Q5EG05 197 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 ANKRD22Q5VYY1 191 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 MAATS1Q7Z4T9 603 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SRLQ86TD4 932 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 CACUL1Q86Y37 369 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 BBS5Q8N3I7 341 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 GRIN3AQ8TCU5 1115 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 IMP4Q96G21 291 aaKnown RBP16.81■□□□□ 0.28
CCNA1-203ENST00000625767 NUDCD1Q96RS6 583 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SLC25A51Q9H1U9 297 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 ZDHHC6Q9H6R6 413 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SCUBE2Q9NQ36 999 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 PAK5Q9P286 719 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 FEZ2Q9UHY8 353 aaPredicted RBP16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SARDHQ9UL12 918 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SNX24Q9Y343 169 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 PCDHGC4Q9Y5F7 938 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 TP73O15350 636 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 NTSR1P30989 418 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 PCSK7Q16549 785 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 POM121L1PQ3SYA9 428 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 NCEH1Q6PIU2 408 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 TMEM92Q6UXU6 159 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 FLCNQ8NFG4 579 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 PJA1Q8NG27 643 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 EDAQ92838 391 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 EXOC4Q96A65 974 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 SHDQ96IW2 340 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 GDAP1L1Q96MZ0 367 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 FCRL5Q96RD9 977 aa16.81■□□□□ 0.28
CCNA1-203ENST00000625767 ERP44Q9BS26 406 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms