RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 KLHDC7AQ5VTJ3 777 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 BROXQ5VW32 411 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 NAA35Q5VZE5 725 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 RWDD4Q6NW29 188 aaKnown RBP19.3■□□□□ 0.68
SMN1-211ENST00000625245 NOP9Q86U38 636 aaKnown RBP19.3■□□□□ 0.68
SMN1-211ENST00000625245 PARGQ86W56 976 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 EMC1Q8N766 993 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 LMX1AQ8TE12 382 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 POLR1BQ9H9Y6 1135 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 METTL5Q9NRN9 209 aaKnown RBP19.3■□□□□ 0.68
SMN1-211ENST00000625245 TMEM59LQ9UK28 342 aa19.3■□□□□ 0.68
SMN1-211ENST00000625245 RP1P56715 2156 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 C16orf96A6NNT2 1141 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 TSPAN6O43657 245 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 LSM8O95777 96 aaKnown RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 MMEP08473 750 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 NME1P15531 152 aaKnown RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 JUNDP17535 347 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 ABL2P42684 1182 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 LSSP48449 732 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 DEFB133Q30KQ1 61 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 RAB6CQ53S08 254 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 MIIPQ5JXC2 388 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 ZCCHC8Q6NZY4 707 aaKnown RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 LEKR1Q6ZMV7 388 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 EFL1Q7Z2Z2 1120 aaKnown RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 PHLDB2Q86SQ0 1253 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 LSM14AQ8ND56 463 aaKnown RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 KLF6Q99612 283 aaPredicted RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 C1QTNF2Q9BXJ5 285 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 RAB6CQ9H0N0 254 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 GPR27Q9NS67 375 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 PPARGC1AQ9UBK2 798 aaKnown RBP19.29■□□□□ 0.68
SMN1-211ENST00000625245 OR12D3Q9UGF7 316 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 DNAI1Q9UI46 699 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 KLF15Q9UIH9 416 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 GGT7Q9UJ14 662 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 ITM2BQ9Y287 266 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
SMN1-211ENST00000625245 KRIT1O00522 736 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 AQP9O43315 295 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 CD160O95971 181 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 TGM2P21980 687 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 ETFBP38117 255 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 ARL13BQ3SXY8 428 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 TAF1BQ53T94 588 aaPredicted RBP19.28■□□□□ 0.68
SMN1-211ENST00000625245 ZNF805Q5CZA5 627 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 TPRG1LQ5T0D9 272 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 GUSBP11Q6P575 273 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 BNIPLQ7Z465 357 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 KCNE4Q8WWG9 221 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 RAB7BQ96AH8 199 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 ISG20Q96AZ6 181 aaKnown RBP19.28■□□□□ 0.68
SMN1-211ENST00000625245 HIC2Q96JB3 615 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 LENG8Q96PV6 779 aaPredicted RBP19.28■□□□□ 0.68
SMN1-211ENST00000625245 IL12RB2Q99665 862 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 NDFIP2Q9NV92 336 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 HPCAL4Q9UM19 191 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 CSNK1G3Q9Y6M4 447 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 KIF26BQ2KJY2 2108 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 CHD5Q8TDI0 1954 aa19.28■□□□□ 0.68
SMN1-211ENST00000625245 HELZ2Q9BYK8 2649 aaKnown RBP19.27■□□□□ 0.68
SMN1-211ENST00000625245 SPINT1O43278 529 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 UGT2B4P06133 528 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 UCHL3P15374 230 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 THOP1P52888 689 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 SNRPD1P62314 119 aaKnown RBP19.27■□□□□ 0.68
SMN1-211ENST00000625245 NOMO3P69849 1222 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 POLD3Q15054 466 aaPredicted RBP19.27■□□□□ 0.68
SMN1-211ENST00000625245 ISXQ2M1V0 245 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 C15orf59Q2T9L4 293 aaPredicted RBP19.27■□□□□ 0.68
SMN1-211ENST00000625245 C3orf38Q5JPI3 329 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 ARHGAP40Q5TG30 622 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 CRTC1Q6UUV9 634 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 ZSCAN30Q86W11 494 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 PLPP6Q8IY26 295 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 RXFP2Q8WXD0 754 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 ARHGEF2Q92974 986 aaKnown RBP19.27■□□□□ 0.68
SMN1-211ENST00000625245 NAA15Q9BXJ9 866 aaKnown RBP19.27■□□□□ 0.68
SMN1-211ENST00000625245 CPNE5Q9HCH3 593 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 NCKIPSDQ9NZQ3 722 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 SATB2Q9UPW6 733 aa19.27■□□□□ 0.68
SMN1-211ENST00000625245 KLK10O43240 276 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 DXOO77932 396 aaKnown RBP19.26■□□□□ 0.67
SMN1-211ENST00000625245 POP4O95707 220 aaKnown RBP19.26■□□□□ 0.67
SMN1-211ENST00000625245 RHOQP17081 205 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 SDC4P31431 198 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 ADRA1BP35368 520 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 GEMIN4P57678 1058 aaKnown RBP19.26■□□□□ 0.67
SMN1-211ENST00000625245 TMPRSS3P57727 454 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 ERVPABLB-1P60509 514 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 EIF2B5Q13144 721 aaKnown RBP19.26■□□□□ 0.67
SMN1-211ENST00000625245 C1orf61Q13536 156 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 NR0B2Q15466 257 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 MYLK3Q32MK0 819 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 LRRC73Q5JTD7 316 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 ARCQ7LC44 396 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 ZNF605Q86T29 641 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 VPS36Q86VN1 386 aa19.26■□□□□ 0.67
SMN1-211ENST00000625245 ZNF354CQ86Y25 554 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms