RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 MICU2Q8IYU8 434 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 WFIKKN2Q8TEU8 576 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 ATP8B4Q8TF62 1192 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 DDX1Q92499 740 aaKnown RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 GRID1Q9ULK0 1009 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 EFR3BQ9Y2G0 817 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 PPP2R2CQ9Y2T4 447 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SERPINB7O75635 380 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 NDUFB10O96000 172 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SERPINA1P01009 418 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 ASLP04424 464 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SEC13P55735 322 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 IL27RAQ6UWB1 636 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 ATG9AQ7Z3C6 839 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 MAML3Q96JK9 1138 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 DCBLD2Q96PD2 775 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 NELL2Q99435 816 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 RHOBTB2Q9BYZ6 727 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 IMP3Q9NV31 184 aaKnown RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SETD4Q9NVD3 440 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 EURLQ9NYK6 297 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SAMD4AQ9UPU9 718 aaKnown RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 INVSQ9Y283 1065 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SPATA31A5Q5VU36 1347 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SPATA31A7Q8IWB4 1347 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 PDXKO00764 312 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 OXTRP30559 389 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 HSF2Q03933 536 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SAMD4BQ5PRF9 694 aaKnown RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 METTL16Q86W50 562 aaKnown RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 RAB43Q86YS6 212 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 OR4C15Q8NGM1 316 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 SLC25A14O95258 325 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 ABCB1P08183 1280 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-205ENST00000623535 ATP6V1B1P15313 513 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 GPAT3Q53EU6 434 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 C16orf46Q6P387 395 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 LRRN4CLQ8ND94 238 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 THRSPQ92748 146 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 ZSWIM3Q96MP5 696 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 PTGES2Q9H7Z7 377 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 PHF11Q9UIL8 331 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 FBXW2Q9UKT8 454 aa6.36□□□□□ -1.39
CDKL5-205ENST00000623535 TEX13CA0A0J9YWL9 993 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 A0A0X1KG70 313 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 TBL1XO60907 577 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SCGNO76038 276 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CER1O95813 267 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FAM91A1Q658Y4 838 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM126BQ8IUX1 230 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 UBR7Q8N806 425 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 HELQQ8TDG4 1101 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 OSGEPQ9NPF4 335 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PSMD13Q9UNM6 376 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 DUSP10Q9Y6W6 482 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FAM227AF5H4B4 570 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 DBTP11182 482 aaKnown RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 TMED1Q13445 227 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CRY1Q16526 586 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CWF19L1Q69YN2 538 aaKnown RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CHTF18Q8WVB6 975 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ACOT12Q8WYK0 555 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ZNF669Q96BR6 464 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 DCP1AQ9NPI6 582 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FKBP14Q9NWM8 211 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 A0A1W2PQ27 194 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 A0A1W2PQ64 194 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 A0A1W2PQD8 194 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SH2D7A6NKC9 451 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FAM25AB3EWG3 89 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FAM25CB3EWG5 89 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FAM25GB3EWG6 89 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 MYL12BO14950 172 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 NUAK1O60285 661 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 EPN2O95208 641 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 HNRNPCP07910 306 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 MRPS35P82673 323 aaKnown RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 HIC1Q14526 733 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ACSM2BQ68CK6 577 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 EEF1AKMT1Q8WVE0 214 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 STAP2Q9UGK3 403 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CLASP1Q7Z460 1538 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FRMPD4Q14CM0 1322 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 NCF1BA6NI72 391 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 NCF1CA8MVU1 366 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 NCF1P14598 390 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ALDH4A1P30038 563 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 RAP1GAP2Q684P5 730 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SPATA31E1Q6ZUB1 1445 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 USP6NLQ92738 828 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 RFT1Q96AA3 541 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CASD1Q96PB1 797 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ASB2Q96Q27 587 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 KCNK16Q96T55 309 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ASF1AQ9Y294 204 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 RPH3AQ9Y2J0 694 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PTPRTO14522 1441 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SEPT4O43236 478 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms