RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 SLC1A4P43007 532 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 AVPR1BP47901 424 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 RENBPP51606 427 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 ALDH18A1P54886 795 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 TPTEP56180 551 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 UBASH3AP57075 661 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FKBP1BP68106 108 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 SIM1P81133 766 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 GABPAQ06546 454 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 SPP2Q13103 211 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 VGLL4Q14135 290 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PFKFB3Q16875 520 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 BTBD16Q32M84 506 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PRR16Q569H4 304 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 KRT79Q5XKE5 535 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A2PQ658T7 463 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 LAIR1Q6GTX8 287 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 TATDN1Q6P1N9 297 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PARS2Q7L3T8 475 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 LDLRAD3Q86YD5 345 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 LRRC71Q8N4P6 559 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PDILTQ8N807 584 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 SPC24Q8NBT2 197 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 RP9Q8TA86 221 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 CHURC1Q8WUH1 139 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PIBF1Q8WXW3 757 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 OPTNQ96CV9 577 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 CCDC43Q96MW1 224 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 USP28Q96RU2 1077 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 NUDT22Q9BRQ3 303 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FSD1LQ9BXM9 530 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 NT5C3AQ9H0P0 336 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PABPC3Q9H361 631 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 DNAJC18Q9H819 358 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 VAT1LQ9HCJ6 419 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PRDM8Q9NQV8 689 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 ITM2CQ9NQX7 267 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 LRIT1Q9P2V4 623 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 NKX1-2Q9UD57 310 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATRX-209ENST00000623242 RABGAP1Q9Y3P9 1069 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 CLIC4Q9Y696 253 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 DGKBQ9Y6T7 804 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 NAV1Q8NEY1 1877 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 MYH7P12883 1935 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 SCN4AP35499 1836 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 SMCO2A6NFE2 343 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 A8MVJ9 347 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 BTBD18B2RXH4 712 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 B4DLN1 442 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 M0R3H8 397 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 PSMD9O00233 223 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 KIAA0355O15063 1070 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 FOXN1O15353 648 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 POLR2DO15514 142 aaKnown RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 CA12O43570 354 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 AKAP8O43823 692 aaKnown RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 CCNT1O60563 726 aaKnown RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 RPP40O75818 363 aaKnown RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 ACTL6BO94805 426 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 PRKCBP05771 671 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 ITGA2BP08514 1039 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 EBLN1P0CF75 366 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 DHRS4L1P0CG22 281 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 GOLGA8HP0CJ92 632 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TMEM225BP0DP42 221 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 FPR3P25089 353 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 PRPHP41219 470 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 DIO1P49895 249 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 NDUFA8P51970 172 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 HMGCS2P54868 508 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 IRX3P78415 501 aaPredicted RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 PPATQ06203 517 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 GPS2Q13227 327 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TUBB2AQ13885 445 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 KCNJ12Q14500 433 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TAF5Q15542 800 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 PTPN14Q15678 1187 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TIGD6Q17RP2 521 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 SHROOM1Q2M3G4 852 aaPredicted RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 TRIM60Q495X7 471 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 RESP18Q5W5W9 173 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 HAUS3Q68CZ6 603 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 SARM1Q6SZW1 724 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 PCSK4Q6UW60 755 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 KRBA2Q6ZNG9 492 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TMTC3Q6ZXV5 915 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 ERO1BQ86YB8 467 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 PDCL2Q8N4E4 241 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 SLC16A11Q8NCK7 471 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 KIF18AQ8NI77 898 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 ACER1Q8TDN7 264 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 CLMNQ96JQ2 1002 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TMEM47Q9BQJ4 181 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 RTKNQ9BST9 563 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 DDX23Q9BUQ8 820 aaKnown RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 TUBB2BQ9BVA1 445 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 DPCDQ9BVM2 203 aaPredicted RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 SPZ1Q9BXG8 430 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms