RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ARL4AP40617 200 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 NME5P56597 212 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 FRG1Q14331 258 aaKnown RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 ANO4Q32M45 955 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 DCAF6Q58WW2 860 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 LRRC8EQ6NSJ5 796 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 C16orf87Q6PH81 154 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ERMP1Q7Z2K6 904 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 CBR4Q8N4T8 237 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 MFSD2AQ8NA29 543 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 RNF169Q8NCN4 708 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 DNAI2Q9GZS0 605 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 BFARQ9NZS9 450 aa14.29□□□□□ -0.12
LDB3-209ENST00000623056 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 RUVBL2Q9Y230 463 aaKnown RBP14.29□□□□□ -0.12
LDB3-209ENST00000623056 PARP14Q460N5 1801 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 SSC5DA1L4H1 1573 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 TARM1B6A8C7 271 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 WNT10BO00744 389 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 CLASP2O75122 1294 aaKnown RBP14.28□□□□□ -0.12
LDB3-209ENST00000623056 GJB1P08034 283 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 STAG3L1P0CL83 205 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 ARSAP15289 507 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 PPIL2Q13356 520 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 STXBP2Q15833 593 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 PID1Q7Z2X4 250 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 FSTL5Q8N475 847 aaPredicted RBP14.28□□□□□ -0.12
LDB3-209ENST00000623056 ANKRD52Q8NB46 1076 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 CANT1Q8WVQ1 401 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 TANKQ92844 425 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 GPR22Q99680 433 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 SLX1AQ9BQ83 275 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 ADI1Q9BV57 179 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 YIPF2Q9BWQ6 316 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 FZD8Q9H461 694 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 ARMC7Q9H6L4 198 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 SFMBT1Q9UHJ3 866 aa14.28□□□□□ -0.12
LDB3-209ENST00000623056 SOBPA7XYQ1 873 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 GOLGA8TH3BQL2 631 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 UBA1P22314 1058 aaKnown RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 AVPR1AP37288 418 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 RXRGP48443 463 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 BNIP3Q12983 259 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 ATP1A4Q13733 1029 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 RAB39AQ14964 217 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 MAPRE2Q15555 327 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 HSDL1Q3SXM5 330 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 AGKQ53H12 422 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 TMEM26Q6ZUK4 368 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 DHFR2Q86XF0 187 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 PACRGLQ8N7B6 248 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 DNAAF3Q8N9W5 541 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 AGBL3Q8NEM8 1001 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 SLC35F5Q8WV83 523 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 PPP1R10Q96QC0 940 aaKnown RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 NEURL2Q9BR09 285 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 GPATCH1Q9BRR8 931 aaKnown RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 NAA50Q9GZZ1 169 aaKnown RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 PRDM12Q9H4Q4 367 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 ARMC1Q9NVT9 282 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 GMPR2Q9P2T1 348 aaKnown RBP14.27□□□□□ -0.12
LDB3-209ENST00000623056 XPR1Q9UBH6 696 aa14.27□□□□□ -0.12
LDB3-209ENST00000623056 SLC35E2BP0CK96 405 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 ATP6V1B2P21281 511 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 GRIA3P42263 894 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 MERTKQ12866 999 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 FASTKQ14296 549 aaKnown RBP14.27□□□□□ -0.13
LDB3-209ENST00000623056 USP10Q14694 798 aaKnown RBP14.27□□□□□ -0.13
LDB3-209ENST00000623056 TMEM132BQ14DG7 1078 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 SOWAHAQ2M3V2 549 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 IRAK1BP1Q5VVH5 260 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 LAYNQ6UX15 382 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 TRIM50Q86XT4 487 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 CAMK1DQ8IU85 385 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 EPHX4Q8IUS5 362 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 CENPLQ8N0S6 344 aaPredicted RBP14.27□□□□□ -0.13
LDB3-209ENST00000623056 CHPT1Q8WUD6 406 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 FTHL17Q9BXU8 183 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 UPF3AQ9H1J1 476 aaKnown RBP14.27□□□□□ -0.13
LDB3-209ENST00000623056 ACAD9Q9H845 621 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 GTSE1Q9NYZ3 720 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 TMEM181Q9P2C4 612 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 FZD1Q9UP38 647 aa14.27□□□□□ -0.13
LDB3-209ENST00000623056 TMEM247A6NEH6 219 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 TRIM64BA6NI03 449 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 KCNK1O00180 336 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 BAIAP3O94812 1187 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 AP2A1O95782 977 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 TTKP33981 857 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 ETFBP38117 255 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 HADHAP40939 763 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 BMXP51813 675 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 SQLEQ14534 574 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 MOGQ16653 247 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms