RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KRT1P04264 644 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 GSNP06396 782 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 CAPN1P07384 714 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ASNSP08243 561 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 C7P10643 843 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 KITP10721 976 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 NELFEP18615 380 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 XRCC1P18887 633 aaPredicted RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TNNI1P19237 187 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 GNA15P30679 374 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 SLC9A3P48764 834 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 RAD23AP54725 363 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 NME5P56597 212 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ILF2Q12905 390 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TARDBPQ13148 414 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 BAATQ14032 418 aaPredicted RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TEDDM1Q5T9Z0 273 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ARHGEF16Q5VV41 709 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 SWSAP1Q6NVH7 229 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 KCTD8Q6ZWB6 473 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 BTLAQ7Z6A9 289 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TFAP2DQ7Z6R9 452 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF677Q86XU0 584 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 PHF13Q86YI8 300 aaPredicted RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 CTAGE3PQ8IX95 158 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 MFSD4AQ8N468 514 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 NPLOC4Q8TAT6 608 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 SLC2A14Q8TDB8 520 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 SLC44A1Q8WWI5 657 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ATG4CQ96DT6 458 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 DUS3LQ96G46 650 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 SERAC1Q96JX3 654 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 WDR83Q9BRX9 315 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 BEGAINQ9BUH8 593 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 SCPEP1Q9HB40 452 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 CD320Q9NPF0 282 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TCF7L2Q9NQB0 619 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 DUS2Q9NX74 493 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 POLHQ9Y253 713 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TCAF1Q9Y4C2 921 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 PCDHA10Q9Y5I2 948 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TCRBV5S1A1TA0A578 114 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 E7ESA3 106 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 F8VP50 259 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 GOLGA8SH3BPF8 625 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM77I1YAP6 450 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 hCG_2039718K7EN88 272 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC9A3R1O14745 358 aaPredicted RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 PTTG1O95997 202 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 PRLP01236 227 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 INHBAP08476 426 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 ME2P23368 584 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 OR3A3P47888 321 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 LIG4P49917 911 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 HLCSP50747 726 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 ARSEP51690 589 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 MRPS15P82914 257 aaKnown RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 IFITM3Q01628 133 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 VAC14Q08AM6 782 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 GPS1Q13098 491 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 MMRN1Q13201 1228 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 MTM1Q13496 603 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 NAB1Q13506 487 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 MAPRE2Q15555 327 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 MTERF2Q49AM1 385 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 BRDTQ58F21 947 aaPredicted RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 WDR44Q5JSH3 913 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 FAM182AQ5T1J6 154 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 LIN9Q5TKA1 542 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 FAM205BPQ63HN1 556 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 METTL2BQ6P1Q9 378 aaKnown RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 FKBP9P1Q75LS8 142 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 PGAM4Q8N0Y7 254 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 ZCCHC7Q8N3Z6 543 aaKnown RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 BEND7Q8N7W2 519 aaPredicted RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 ANKFN1Q8N957 763 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 SP7Q8TDD2 431 aaPredicted RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 FIG4Q92562 907 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 OMA1Q96E52 524 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 DEPDC7Q96QD5 511 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 ACAT2Q9BWD1 397 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 ADAMTS10Q9H324 1103 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 MRPL40Q9NQ50 206 aaKnown RBP7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 CYP26B1Q9NR63 512 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 RNF146Q9NTX7 359 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC27A5Q9Y2P5 690 aa7.59□□□□□ -1.2
TRIM49B-202ENST00000622138 PCM1Q15154 2024 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 COL11A1P12107 1806 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 TK2O00142 265 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 GPR25O00155 361 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 PLOD2O00469 737 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC22A2O15244 555 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 BPGMP07738 259 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 NR3C2P08235 984 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 RALBP11234 206 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC26A3P40879 764 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 RFTN1Q14699 578 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms