RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PAPOLAP51003 745 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 YWHAHQ04917 246 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 KLC1Q07866 573 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 DSC1Q08554 894 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 NSUN2Q08J23 767 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDPN-212ENST00000621990 PRKAA1Q13131 559 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 LBRQ14739 615 aaKnown RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 CFAP157Q5JU67 520 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 LRRC8EQ6NSJ5 796 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 KDELC1Q6UW63 502 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 KIAA0408Q6ZU52 694 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 RAPH1Q70E73 1250 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 SLC41A1Q8IVJ1 513 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 CEP97Q8IW35 865 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 DENND6AQ8IWF6 608 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 KBTBD2Q8IY47 623 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 LSMEM2Q8N112 164 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 PPFIBP2Q8ND30 876 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 KCTD4Q8WVF5 259 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 JADE3Q92613 823 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 OR52B2Q96RD2 323 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 RANBP9Q96S59 729 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 FAM167BQ9BTA0 163 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 PRDM5Q9NQX1 630 aaPredicted RBP9.55□□□□□ -0.88
PDPN-212ENST00000621990 TBC1D13Q9NVG8 400 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 RBM22Q9NW64 420 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDPN-212ENST00000621990 HTTP42858 3142 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 MIA3Q5JRA6 1907 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 BRCA2P51587 3418 aa9.55□□□□□ -0.88
PDPN-212ENST00000621990 GRID2O43424 1007 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 KIF1CO43896 1103 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 SLC10A3P09131 477 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 PAMP19021 973 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 NCF2P19878 526 aaPredicted RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 MPSTP25325 297 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 GRIK1P39086 918 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 NDST2P52849 883 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 MPP1Q00013 466 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 MSLNQ13421 630 aaPredicted RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 ARL13AQ5H913 290 aaPredicted RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 TSTD2Q5T7W7 516 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 PIK3R6Q5UE93 754 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SEL1L3Q68CR1 1132 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 GALNT7Q86SF2 657 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 C14orf80Q86SX3 495 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 MON1AQ86VX9 555 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 IMP4Q96G21 291 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 FUBP3Q96I24 572 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDPN-212ENST00000621990 TSNARE1Q96NA8 513 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 FTHL17Q9BXU8 183 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SLC25A51Q9H1U9 297 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 S100A14Q9HCY8 104 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 NDE1Q9NXR1 346 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SLC2A6Q9UGQ3 507 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 PPM1HQ9ULR3 514 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 ARHGAP26Q9UNA1 814 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 IGLV3-10A0A075B6K4 115 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 A0A087X1B8 175 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 FAM95CA0A1B0GW59 222 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 E9PBE3 544 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 DLX3O60479 287 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 B4GALT3O60512 393 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 KLHL41O60662 606 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 STMN1P16949 149 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 TFEBP19484 476 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SERPINB5P36952 375 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 MTTPP55157 894 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 DNAJB13P59910 316 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 POU4F1Q01851 419 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 DLG1Q12959 904 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 CCNIQ14094 377 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 HNRNPDQ14103 355 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 SLC14A2Q15849 920 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 KCNA10Q16322 511 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 RGMBQ6NW40 437 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 SAPCD2Q86UD0 394 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 APLFQ8IW19 511 aaPredicted RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 FBXW8Q8N3Y1 598 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 TADA1Q96BN2 335 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 C8orf48Q96LL4 319 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 CCDC28BQ9BUN5 200 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 FSD1LQ9BXM9 530 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 TRPV6Q9H1D0 765 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 MAN1C1Q9NR34 630 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 IL37Q9NZH6 218 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 IPO11Q9UI26 975 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 RUVBL2Q9Y230 463 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 INPP5FQ9Y2H2 1132 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 THSD7BQ9C0I4 1608 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 FAM92AA1XBS5 289 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 BUD23O43709 281 aaKnown RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 NPHS1O60500 1241 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 PAPSS2O95340 614 aaPredicted RBP9.54□□□□□ -0.88
PDPN-212ENST00000621990 SLC2A3P11169 496 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 YY1P25490 414 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 CD151P48509 253 aa9.54□□□□□ -0.88
PDPN-212ENST00000621990 CTBP1Q13363 440 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms