RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 SNRNP27Q8WVK2 155 aaKnown RBP17.05■□□□□ 0.32
TARDBP-225ENST00000621715 C1orf74Q96LT6 269 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 SLC46A1Q96NT5 459 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 C1QTNF2Q9BXJ5 285 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 TM6SF2Q9BZW4 377 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 DNAJC12Q9UKB3 198 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 AHCTF1Q8WYP5 2266 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 NEMP2A6NFY4 417 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 J3QKU1 62 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 AQP9O43315 295 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 CELA2BP08218 269 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-225ENST00000621715 JUNDP17535 347 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 ITIH2P19823 946 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 DNA2P51530 1060 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 PFN3P60673 137 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 C1orf61Q13536 156 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 CARD16Q5EG05 197 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 LRRC73Q5JTD7 316 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 KIAA1161Q6NSJ0 714 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 LEKR1Q6ZMV7 388 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 LSMEM2Q8N112 164 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 LMX1AQ8TE12 382 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 CFAP57Q96MR6 1250 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 HEPHQ9BQS7 1158 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 DUSP23Q9BVJ7 150 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 ABCG4Q9H172 646 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 ZDHHC6Q9H6R6 413 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 SYNCQ9H7C4 482 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 ATP13A1Q9HD20 1204 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 NEU3Q9UQ49 428 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 NAV2Q8IVL1 2488 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 LRP4O75096 1905 aa17.04■□□□□ 0.32
TARDBP-225ENST00000621715 ILVBLA1L0T0 632 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 EME2A4GXA9 379 aaPredicted RBP17.03■□□□□ 0.32
TARDBP-225ENST00000621715 CDRT15L2A8MXV6 281 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 AP1G1O43747 822 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 CDH5P33151 784 aaPredicted RBP17.03■□□□□ 0.32
TARDBP-225ENST00000621715 KRT9P35527 623 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 IGFALSP35858 605 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 RABIFP47224 123 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 GABRB2P47870 512 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 RHDQ02161 417 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 GNA12Q03113 381 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 PTK2Q05397 1052 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 VAC14Q08AM6 782 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 MTA1Q13330 715 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 SLC25A52Q3SY17 297 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 IGF2-ASQ6U949 168 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 FAM131BQ86XD5 332 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 DCP2Q8IU60 420 aaKnown RBP17.03■□□□□ 0.32
TARDBP-225ENST00000621715 SLC35F3Q8IY50 421 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 DRC7Q8IY82 874 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 FAM71AQ8IYT1 594 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 PCDH20Q8N6Y1 951 aaKnown RBP17.03■□□□□ 0.32
TARDBP-225ENST00000621715 NETO2Q8NC67 525 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 PPP1R16AQ96I34 528 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 FEM1CQ96JP0 617 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 LENG8Q96PV6 779 aaPredicted RBP17.03■□□□□ 0.32
TARDBP-225ENST00000621715 BOCQ9BWV1 1114 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 CEP44Q9C0F1 390 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 CLPBQ9H078 707 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 USP29Q9HBJ7 922 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 HECAQ9UBI9 543 aaPredicted RBP17.03■□□□□ 0.32
TARDBP-225ENST00000621715 TMEM59LQ9UK28 342 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 CSNK1G3Q9Y6M4 447 aa17.03■□□□□ 0.32
TARDBP-225ENST00000621715 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
TARDBP-225ENST00000621715 C16orf96A6NNT2 1141 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 MUSKO15146 869 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 EFSO43281 561 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 RECQLP46063 649 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-225ENST00000621715 DUSP3P51452 185 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-225ENST00000621715 CCDC15Q0P6D6 951 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 FAM102AQ5T9C2 384 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-225ENST00000621715 BROXQ5VW32 411 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 CENPTQ96BT3 561 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 WBP1Q96G27 269 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 LRRC61Q9BV99 259 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 MBNL1Q9NR56 388 aaKnown RBP17.02■□□□□ 0.32
TARDBP-225ENST00000621715 THSD1Q9NS62 852 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 RRN3Q9NYV6 651 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 RWDD2AQ9UIY3 292 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 RABGEF1Q9UJ41 708 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 STAP1Q9ULZ2 295 aa17.02■□□□□ 0.32
TARDBP-225ENST00000621715 SCN8AQ9UQD0 1980 aa17.02■□□□□ 0.31
TARDBP-225ENST00000621715 FAM72CH0Y354 149 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 GOLGA8SH3BPF8 625 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 UCNP55089 124 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 SRSF6Q13247 344 aaKnown RBP17.01■□□□□ 0.31
TARDBP-225ENST00000621715 CLN3Q13286 438 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 TCEA2Q15560 299 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 ATXN7L2Q5T6C5 722 aaPredicted RBP17.01■□□□□ 0.31
TARDBP-225ENST00000621715 FAM72AQ5TYM5 149 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 TAF3Q5VWG9 929 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 KCTD16Q68DU8 428 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 FAM72DQ6L9T8 149 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 RETSATQ6NUM9 610 aa17.01■□□□□ 0.31
TARDBP-225ENST00000621715 FOXR1Q6PIV2 292 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms