RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GDF3Q9NR23 364 aa9.9□□□□□ -0.83
CLTCL1-211ENST00000621271 ATAD3AQ9NVI7 634 aa9.9□□□□□ -0.83
CLTCL1-211ENST00000621271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.9□□□□□ -0.83
CLTCL1-211ENST00000621271 PCDHA2Q9Y5H9 948 aa9.9□□□□□ -0.83
CLTCL1-211ENST00000621271 COL3A1P02461 1466 aaPredicted RBP9.9□□□□□ -0.83
CLTCL1-211ENST00000621271 CES2O00748 559 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 PER2O15055 1255 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CCNDBP1O95273 360 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CFIP05156 583 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 HNF4AP41235 474 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CPA2P48052 419 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ZNF143P52747 638 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SP2Q02086 613 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ZNF844Q08AG5 666 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 VAC14Q08AM6 782 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 RALGDSQ12967 914 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CCDC153Q494R4 210 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ZCWPW2Q504Y3 356 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 BRMS1LQ5PSV4 323 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CES3Q6UWW8 571 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CREG2Q8IUH2 290 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM20CQ8IXL6 584 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 KREMEN2Q8NCW0 462 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 DBF4BQ8NFT6 615 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 METTL21AQ8WXB1 218 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 INPP4AQ96PE3 977 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 TTLL2Q9BWV7 592 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ARIH1Q9Y4X5 557 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 INSL6Q9Y581 213 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 COPG1Q9Y678 874 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CLUHO75153 1309 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CYP3A7-CYP3A51PA0A087WV96 503 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 A0A096LPK6 155 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 RHPN2P1A8MT19 583 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CLDN5O00501 218 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 VAV1P15498 845 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CYP3A7P24462 503 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 IFNGR2P38484 337 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ACLYP53396 1101 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SEC13P55735 322 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 MRPS5P82675 430 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 STXBP5Q5T5C0 1151 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 TAF8Q7Z7C8 310 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 PSTKQ8IV42 348 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ATG16L2Q8NAA4 619 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SELENOMQ8WWX9 145 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 PROX1Q92786 737 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 COPS8Q99627 209 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SRRM3A6NNA2 597 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SYN3O14994 580 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 BUD23O43709 281 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 VPS4BO75351 444 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SNUPNO95149 360 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CTPS1P17812 591 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ATP6V1B2P21281 511 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 RBL1P28749 1068 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM180AQ6UWF9 173 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 TSTD1Q8NFU3 115 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 TIFAQ96CG3 184 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ASB2Q96Q27 587 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 S100A13Q99584 98 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 TLR10Q9BXR5 811 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SNX6Q9UNH7 406 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SMIM28A0A1B0GU29 152 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 C8AP07357 584 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM153BP0C7A2 387 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 IDSP22304 550 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 PRKAA2P54646 552 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 CBX2Q14781 532 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 MEA1Q16626 185 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 AP5B1Q2VPB7 878 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM153CQ494X1 144 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 BHLHB9Q6PI77 547 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 ZNF248Q8NDW4 579 aa9.89□□□□□ -0.83
CLTCL1-211ENST00000621271 SMPD1P17405 629 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 PAICSP22234 425 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 CORO1AP31146 461 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 ABRQ12979 859 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 RRP1BQ14684 758 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 AGKQ53H12 422 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 TMC3Q7Z5M5 1100 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM126BQ8IXS8 530 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 CCDC185Q8N715 623 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 STAG3L4Q8TBR4 150 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 SCLYQ96I15 445 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 GPR88Q9GZN0 384 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 MAF1Q9H063 256 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 CDC42EP4Q9H3Q1 356 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 NEK6Q9HC98 313 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 BLOC1S4Q9NUP1 217 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 TRMT13Q9NUP7 481 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 HEY2Q9UBP5 337 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 GGA2Q9UJY4 613 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 MAPRE3Q9UPY8 281 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 A0A0G2JLL6 359 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 YDJCA8MPS7 323 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 H0Y858 1186 aa9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 LPOP22079 712 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-211ENST00000621271 PAX7P23759 505 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms