RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ZNF317Q96PQ6 595 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 GPR20Q99678 358 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 C9orf16Q9BUW7 83 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4Q9UBX2 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 GNG14A0A1W2PPG7 69 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MGAT4DA6NG13 374 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SPTLC1O15269 473 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PMM2O15305 246 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 RAMP2O60895 175 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TM7SF2O76062 418 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF682O95780 498 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ITGB6P18564 788 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 HK2P52789 917 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 NEDD8Q15843 81 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 OTUD3Q5T2D3 398 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TAF2Q6P1X5 1199 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 RBM44Q6ZP01 1051 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 RD3Q7Z3Z2 195 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DEFB132Q7Z7B7 95 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SLC4A11Q8NBS3 891 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 QKIQ96PU8 341 aaKnown RBP eCLIP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SEMA4BQ9NPR2 832 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 IMPAD1Q9NX62 359 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ETAA1Q9NY74 926 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TUBGCP4Q9UGJ1 667 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 POLG2Q9UHN1 485 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TCEA3O75764 348 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CCDC166P0CW27 439 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 FGFR1P11362 822 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CCNB1P14635 433 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 HALP42357 657 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ASPAP45381 313 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF135P52742 658 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 LCLAT1Q6UWP7 414 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TTC7BQ86TV6 843 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TMEM86AQ8N2M4 240 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 FNIP1Q8TF40 1166 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 NSMCE2Q96MF7 247 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CSPG4P5Q96PW8 444 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ACE2Q9BYF1 805 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SPG21Q9NZD8 308 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF180Q9UJW8 692 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 NUDT5Q9UKK9 219 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 KIF13AQ9H1H9 1805 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MYH8P13535 1937 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MFSD11O43934 449 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 DDNO94850 711 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SMIM10L2AP0DMW4 78 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SMIM10L2BP0DMW5 78 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 UQCRBP14927 111 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 OR1E1P30953 314 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CD86P42081 329 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SGCGQ13326 291 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 KHDC1Q4VXA5 237 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 RNF220Q5VTB9 566 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 NEPROQ6NW34 567 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 GLT6D1Q7Z4J2 308 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 RNF145Q96MT1 663 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 COQ4Q9Y3A0 265 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MAGEC1O60732 1142 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ALDH2P05091 517 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SNRPB2P08579 225 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TCF4P15884 667 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MPSTP25325 297 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 YWHAQP27348 245 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ALDH9A1P49189 494 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TMED10P49755 219 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 USP39Q53GS9 565 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 IRAK1BP1Q5VVH5 260 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 OR56A4Q8NGH8 313 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 VPS33AQ96AX1 596 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 C18orf25Q96B23 403 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ABCC13Q9NSE7 274 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CDH22Q9UJ99 828 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 DPPA5A6NC42 116 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 BTN3A1O00481 513 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 FGF10O15520 208 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ZW10O43264 779 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 LDLRP01130 860 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ETS2P15036 469 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ATP5F1P24539 256 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SOX6P35712 828 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MAPK10P53779 464 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 VAC14Q08AM6 782 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SLC39A12Q504Y0 691 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 PPM1JQ5JR12 505 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CERCAMQ5T4B2 595 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ASB2Q96Q27 587 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 DEPDC7Q96QD5 511 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 NPAS2Q99743 824 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 BDH2Q9BUT1 245 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ACSS2Q9NR19 701 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CATSPERZQ9NTU4 200 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 XPR1Q9UBH6 696 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MTF2Q9Y483 593 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 HDAC3O15379 428 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF862O60290 1169 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CYP2A7P20853 494 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SERPINB1P30740 379 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms