RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ITPKCQ96DU7 683 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ASB9Q96DX5 294 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 CPB2Q96IY4 423 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 LGMNQ99538 433 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SPAG4Q9NPE6 437 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 HESX1Q9UBX0 185 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SMCHD1A6NHR9 2005 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 DHRS12A0PJE2 317 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 UBDO15205 165 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ERBB2P04626 1255 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ARPP19P56211 112 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 IFRD2Q12894 506 aaPredicted RBP9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 NBPF12Q5TAG4 269 aaPredicted RBP9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 KDELC2Q7Z4H8 507 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 AKAP14Q86UN6 197 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 KCTD17Q8N5Z5 321 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 PCYOX1LQ8NBM8 494 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 CHURC1Q8WUH1 139 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SLC2A11Q9BYW1 496 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 MAGEB5Q9BZ81 275 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SYBUQ9NX95 663 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 UBP1Q9NZI7 540 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TBC1D14Q9P2M4 693 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 RAP2CQ9Y3L5 183 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 NFASCO94856 1347 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ZNF541Q9H0D2 1346 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ANKRD31Q8N7Z5 1873 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 H0Y858 1186 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 KCNK1O00180 336 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 CCRL2O00421 344 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ALDH2P05091 517 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 CNTFP26441 200 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 IDUAP35475 653 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TNFSF9P41273 254 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ZNF846Q147U1 533 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TKFCQ3LXA3 575 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TICAM1Q8IUC6 712 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 PQLC3Q8N755 202 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ABHD11Q8NFV4 315 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 KCTD4Q8WVF5 259 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 SDCCAG3Q96C92 435 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TSPAN18Q96SJ8 248 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 COQ7Q99807 217 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 DEFB129Q9H1M3 183 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 TP63Q9H3D4 680 aaPredicted RBP9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 MRPL40Q9NQ50 206 aaKnown RBP9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 IARS2Q9NSE4 1012 aaKnown RBP9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 GGA3Q9NZ52 723 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 KLQ9UEF7 1012 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 ERVK-11Q9UQG0 969 aa9.89□□□□□ -0.83
TNFAIP3-210ENST00000620204 C3orf70A6NLC5 250 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SYNCRIPO60506 623 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNX2O60749 519 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 RSL1D1O76021 490 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNAP29O95721 258 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 HARS2P49590 506 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SLC12A2P55011 1212 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 CDK18Q07002 472 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 PPP1R8Q12972 351 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 PRKAA1Q13131 559 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 ZNF460Q14592 562 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 FAM219BQ5XKK7 198 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 BNIPLQ7Z465 357 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 STK32CQ86UX6 486 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 PIGZQ86VD9 579 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 RYBPQ8N488 228 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 WDTC1Q8N5D0 677 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 C7orf31Q8N865 590 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 URGCPQ8TCY9 931 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 FAM151AQ8WW52 585 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 TFAP2CQ92754 450 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 APBB2Q92870 758 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 PHF21BQ96EK2 531 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SDCBP2Q9H190 292 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 VPS33BQ9H267 617 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 KLHL8Q9P2G9 620 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 PSME2Q9UL46 239 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 ARAP2Q8WZ64 1704 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 NEMP2A6NFY4 417 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 PAPSS1O43252 624 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNAP91O60641 907 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 TADA2AO75478 443 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 MAPTP10636 758 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 MTHFD1P11586 935 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 NCK1P16333 377 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 TGM2P21980 687 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SLC7A1P30825 629 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SDC4P31431 198 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SPP2Q13103 211 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SLC12A1Q13621 1099 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 CA9Q16790 459 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 FSTL4Q6MZW2 842 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 CDKL3Q8IVW4 592 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 CCDC60Q8IWA6 550 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 SFRP1Q8N474 314 aa9.88□□□□□ -0.83
TNFAIP3-210ENST00000620204 HDAC11Q96DB2 347 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms