RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 WASH4PA8MWX3 477 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 TTC34A8MYJ7 566 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 MIF4GDA9UHW6 222 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 H0Y626 953 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 K7ERQ8 282 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 EEF2KO00418 725 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 NDC80O14777 642 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 EIF3HO15372 352 aaKnown RBP eCLIP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SLC7A4O43246 635 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SMAD6O43541 496 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 HRO43593 1189 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 DFNA5O60443 496 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RNF8O76064 485 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CPP00450 1065 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ACADMP11310 421 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 HOXB2P14652 356 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 VAV1P15498 845 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 GNSP15586 552 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ERCC2P18074 760 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 KDELR1P24390 212 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 EPHB2P29323 1055 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 HSPA9P38646 679 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 NOP2P46087 812 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 PXNP49023 591 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 FNTBP49356 437 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CDH6P55285 790 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 TPI1P60174 286 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SLC10A2Q12908 348 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF177Q13360 481 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CAMK2GQ13555 558 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CDH18Q13634 790 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF234Q14588 700 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 LLGL1Q15334 1064 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 PLK5Q496M5 336 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 TTC31Q49AM3 519 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 BOLA3Q53S33 107 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 PPP6R3Q5H9R7 873 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 C6orf118Q5T5N4 469 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 FAM46CQ5VWP2 391 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RNF219Q5W0B1 726 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 PMS2CLQ68D20 193 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 C11orf63Q6NUN7 778 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 AADACL2Q6P093 401 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 IL27RAQ6UWB1 636 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 MFSD7Q6UXD7 560 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 LINGO4Q6UY18 593 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 KDM7AQ6ZMT4 941 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ARHGAP36Q6ZRI8 547 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CEP128Q6ZU80 1094 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RFX8Q6ZV50 586 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SYT12Q8IV01 421 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CCDC50Q8IVM0 306 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RHOT2Q8IXI1 618 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 PCDH19Q8TAB3 1148 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 FRS2Q8WU20 508 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 LRRN4Q8WUT4 740 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 MAIP1Q8WWC4 291 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CASKIN2Q8WXE0 1202 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SEC14L1Q92503 715 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ALG3Q92685 438 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SKA1Q96BD8 255 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CENPTQ96BT3 561 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 FAF2Q96CS3 445 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 HMCESQ96FZ2 354 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF419Q96HQ0 510 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CELF6Q96J87 481 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RPL10LQ96L21 214 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CCDC114Q96M63 670 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 NSMCE3Q96MG7 304 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 EPAS1Q99814 870 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 HINFPQ9BQA5 517 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 LRRC1Q9BTT6 524 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 C2orf49Q9BVC5 232 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ACE2Q9BYF1 805 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CIPCQ9C0C6 399 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SLC39A8Q9C0K1 460 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RAB17Q9H0T7 212 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 TMEM245Q9H330 911 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 LRRC19Q9H756 370 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CNOT10Q9H9A5 744 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SGK2Q9HBY8 427 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 CD93Q9NPY3 652 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ITM2CQ9NQX7 267 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 VPS51Q9UID3 782 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 UTP11Q9Y3A2 253 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 FARP1Q9Y4F1 1045 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 STON1Q9Y6Q2 735 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 R4GN57 208 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 SPEGQ15772 3267 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 RALGAPA1Q6GYQ0 2036 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 NYNRINQ9P2P1 1898 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ZZEF1O43149 2961 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 GOLGA6L10A0A0M3HER8 536 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 EDDM13A0A1B0GTR0 161 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 RASA4BC9J798 803 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 J3KR12 359 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 AGPSO00116 658 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PGRMC1O00264 195 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PDE2AO00408 941 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 398.7 ms