RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TRIM69Q86WT6 500 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 RHOT1Q8IXI2 618 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 DEFB119Q8N690 84 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TPCN2Q8NHX9 752 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 MAML1Q92585 1016 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 PIGKQ92643 395 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TCEAL3Q969E4 200 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 ECHDC3Q96DC8 303 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 NSMCE3Q96MG7 304 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 GDAP1L1Q96MZ0 367 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 TSGA13Q96PP4 275 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 RNF157Q96PX1 679 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 OMDQ99983 421 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 OSBPL1AQ9BXW6 950 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 LACRTQ9GZZ8 138 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SMOC1Q9H4F8 434 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 PREBQ9HCU5 417 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 DKK3Q9UBP4 350 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 UBA2Q9UBT2 640 aaPredicted RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 SUSD2Q9UGT4 822 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 IPO11Q9UI26 975 aaKnown RBP8.38□□□□□ -1.07
NEK3-209ENST00000618856 SLC6A14Q9UN76 642 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 ALG6Q9Y672 507 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SLCO1B1Q9Y6L6 691 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 SDK1Q7Z5N4 2213 aa8.38□□□□□ -1.07
NEK3-209ENST00000618856 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 A0A1W2PPC4 97 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 LRRC72A6NJI9 287 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 PLK4O00444 970 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 SLC30A4O14863 429 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 AREL1O15033 823 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 MUSKO15146 869 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 PSTPIP1O43586 416 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 GJB3O75712 270 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 SDHBP21912 280 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 MAOBP27338 520 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 SERPINB6P35237 376 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 NUDT1P36639 197 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 GARSP41250 739 aaKnown RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 RECQLP46063 649 aaPredicted RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 RGRP47804 291 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 SUOXP51687 545 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 VAV2P52735 878 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 GSDMDP57764 484 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 IRX4P78413 519 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 BNC1Q01954 994 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 SLC10A2Q12908 348 aaPredicted RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 KRT81Q14533 505 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 TMEM259Q4ZIN3 620 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 ZNF805Q5CZA5 627 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 TRIM61Q5EBN2 209 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 ALG1LQ6GMV1 187 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 PARS2Q7L3T8 475 aaKnown RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 ZSCAN30Q86W11 494 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 MAP7D3Q8IWC1 876 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 KATNAL2Q8IYT4 538 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 PLD5Q8N7P1 536 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 LRRC57Q8N9N7 239 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 NETO2Q8NC67 525 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 KCTD6Q8NC69 237 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 TSEN2Q8NCE0 465 aaKnown RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 NETO1Q8TDF5 533 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 ASB12Q8WXK4 309 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 RAB7BQ96AH8 199 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 RMDN1Q96DB5 314 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 PPP1R16AQ96I34 528 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 OLFM3Q96PB7 478 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 HINFPQ9BQA5 517 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 TM6SF2Q9BZW4 377 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 DDX56Q9NY93 547 aaKnown RBP8.37□□□□□ -1.07
NEK3-209ENST00000618856 FADS3Q9Y5Q0 445 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 DUSP10Q9Y6W6 482 aa8.37□□□□□ -1.07
NEK3-209ENST00000618856 ATXN2Q99700 1313 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 A0A1W2PR77 199 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 C16orf96A6NNT2 1141 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 DFFAO00273 331 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 KPNA3O00505 521 aaPredicted RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 TRAFD1O14545 582 aaPredicted RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 ARHGAP33O14559 1287 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 WNT9AO14904 365 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 BCAT2O15382 392 aaPredicted RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 INSIG1O15503 277 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 MFSD11O43934 449 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 IGSF6O95976 241 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ADRB3P13945 408 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 GNSP15586 552 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ENGP17813 658 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 CCNCP24863 283 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 GKP32189 559 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 HSPA9P38646 679 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 CDKN2BP42772 138 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 GRIA4P48058 902 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 PEX5P50542 639 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 AFF3P51826 1226 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 NEK3P51956 506 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 RHOAP61586 193 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms