RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	DNM2	P50570	870 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MECP2	P51608	486 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	RNASE9	P60153	205 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PPAT	Q06203	517 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PPIL2	Q13356	520 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	FASTKD3	Q14CZ7	662 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SURF1	Q15526	300 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NPTX1	Q15818	432 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	KRTAP21-3	Q3LHN1	58 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	DNAL1	Q4LDG9	190 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CCDC58	Q4VC31	144 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MANEA	Q5SRI9	462 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NAA35	Q5VZE5	725 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZNF385C	Q66K41	422 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PRPF40B	Q6NWY9	871 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	APOA5	Q6Q788	366 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SUSD1	Q6UWL2	747 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	C4orf22	Q6V702	233 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZFAND4	Q86XD8	727 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TICAM1	Q8IUC6	712 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SLITRK4	Q8IW52	837 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SULF2	Q8IWU5	870 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SRRM1	Q8IYB3	904 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SYCE1	Q8N0S2	351 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SETD9	Q8NE22	299 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	OR10H5	Q8NGA6	315 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PAQR8	Q8TEZ7	354 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PRCC	Q92733	491 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	RHOV	Q96L33	236 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PRAM1	Q96QH2	718 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	VPS35	Q96QK1	796 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CTRC	Q99895	268 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SORBS1	Q9BX66	1292 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TMEM60	Q9H2L4	133 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZNF395	Q9H8N7	513 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SP140L	Q9H930	580 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SUGCT	Q9HAC7	445 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	INTS9	Q9NV88	658 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	FAM8A1	Q9UBU6	413 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ANAPC2	Q9UJX6	822 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SRPRB	Q9Y5M8	271 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SLC12A7	Q9Y666	1083 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	GSAP	A4D1B5	854 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	POLRMT	O00411	1230 aa	Known RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	RGS13	O14921	159 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SLC22A1	O15245	554 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TUSC2	O75896	110 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CSTA	P01040	98 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TFRC	P02786	760 aa	Known RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TCN1	P20061	433 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CTSS	P25774	331 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MAT2A	P31153	395 aa	Known RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NNMT	P40261	264 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MDH1	P40925	334 aa	Known RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NT5C2	P49902	561 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CDH4	P55283	916 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	DRP2	Q13474	957 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MAPK6	Q16659	721 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	KCTD21	Q4G0X4	260 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PLA2G4F	Q68DD2	849 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TRAT1	Q6PIZ9	186 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TBC1D19	Q8N5T2	526 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	BANP	Q8N9N5	519 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ICA1L	Q8NDH6	482 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LPGAT1	Q92604	370 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CYFIP2	Q96F07	1278 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	RNF38	Q9H0F5	515 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	OR51V1	Q9H2C8	321 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NDST4	Q9H3R1	872 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CNTD2	Q9H8S5	307 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PCDH9	Q9HC56	1237 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LNPEP	Q9UIQ6	1025 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CNOT7	Q9UIV1	285 aa	Known RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LIPT1	Q9Y234	373 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZNF175	Q9Y473	711 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PCDH11X	Q9BZA7	1347 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PCDH11Y	Q9BZA8	1340 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NFAT5	O94916	1531 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TRBV23OR9-2	A0A075B6M9	112 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836		A0A0A0MRY4	1105 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	GIPC1	O14908	333 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	EIF3H	O15372	352 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	AP1G1	O43747	822 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ULK1	O75385	1050 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	BEST1	O76090	585 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ONECUT2	O95948	504 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LIPF	P07098	398 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	FH	P07954	510 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	COX5B	P10606	129 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	BMP2	P12643	396 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	AHCY	P23526	432 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	AKAP5	P24588	427 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PPP2R1A	P30153	589 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NUP62	P37198	522 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	COPB1	P53618	953 aa	Known RBP	4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PTPRR	Q15256	657 aa		4.14	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LLGL1	Q15334	1064 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms